Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2226 ATGAAACCAATCAAATTTAGATTGTCATTTCTATTCTTGATACTGGTCTCTAAATGCTTCACTACAGAATCAAAATGTAGCAAAACTTGTGACTTCGCTTTAGCTTCCTATTATATGTTGGAAGGTACAAACTTGACATATATTTTGGACATCATGAAATCCAACCTGGTTTCAAAACCTGAAGATATTGTGAGCTACAACCCTGACACAATACCAAATAAAGATAGTTACAGGACCGAATCAAGAGCGAAAATTCCCTTCCCTTGTGATTGCATCAATGATAAGTTTCTTGGTCACACATTTCTCTACCAGTATCAGCAAATTGCTGAGTTGACTTTTAGCAATTTGACTAATGAGGAGTGGATGGAGAGAGAAAATGTTTATGCAAAAAACTCTATTCCTAAATTTGTGAAGGTTAATGCTACTGTTAACTGTTTCTGTGGGAACAGAAAGGTTTCTAAGGATTATGGATTGTTCATCACATATCCACTTAGAAGTGAGGATAGTTTGGAGTCTATTGCAAAGGATACCGAGATTGAGGCTGATTTGTTGCAGAGGTACAACCCTGGTGTGAATTTCAGCCAAGGGCATGGTATTGTTTTTATTCCAGGGAAAGATAAAAATGGAGTTTATGTTCCCTTTCCGCCTAGCCCTATAAAAGCAGGTCATTTAGCTAGAAGTTTAGTTACTGCTGCAATATCTATTGGAGGAATATGCATGCTTCTGTTATTATCAATTTGTATATATGTTAAGAAGAATATAGAGAAGTCTAAATTGACACCAGAAGATTCAACGGCACCTTCAACTAAAGATGGCACATCTGATAAAGATTCCAATGCTGATACTGGATCCAAATTTATTGTGGTGGACAAATCACCTGAGTTTTCGTACGAAGATTTGGCCAATGCTACAAATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGAGAGGTCTACTATGGTGAGCTGAAAGGAAAGAAAACTGCAATAAAAAAGATGACGATGCTAGCTACAAGAGAATTTCTTGCAGAAATGAAAGTCTTAACAAGCGTTCATCACCGCAATCTGGTACGCTTGATTGGATATTGTATTGAGGGATCTCTATTCCTTGTGTACGAATACATGGACAATGGAAACTTAAGCCAACATCTACATAATTCAGAGAAAGAACCTATGACATGGTCTACCAGATTACAAATTGCTCTGGATGTAGCGAGAGGCCTCGAGTATATTCATGATCATTCAGTGCCTGTATACATCCATCGCGACATTAAATCAGATAATATTTTATTAAATGGAAACTTCAATGGGAAGATTGCTGATTTTGGAATGACCAAACTGACTGATGTTGCAAGTTCAATTGATAACACTGATCATGTCGCTGGCACATTTGGTTACATGCCGCCTGAAAATGCATACGGACATATTTCTCGCAAGATAGATGTATACGCTTTTGGAGTTGTTCTATACGAACTAATTTCTGCTAAAGCAGCTGTGGTCAAAATTGATAAACCTACTACTGAGTTCAAGAGCCTTGAGATTAAGACCAATGAATCTATTGATGAATACAAGAGCCTTGTAGCTTTGTTTGATGAAGTTATTGATCAAGAGGGAGATCCTATAGAAGAAGGTCTAAGAAAACTAGTTGATCCAAGGCTAGGAGATAACTATTCAATTGATTCCATTAACAAGATGGCACAGCTTGCCAAGACTTGCATAAACCGAGACCCGAAACGACGTCCAAGAATGGGAGATGTTGTGGTTTCTCTTATGAAACTAAATTCTACTATTGATGGTGGAAGTACAATAGTGCAGCATTGA 1830 0.3743 MKPIKFRLSFLFLILVSKCFTTESKCSKTCDFALASYYMLEGTNLTYILDIMKSNLVSKPEDIVSYNPDTIPNKDSYRTESRAKIPFPCDCINDKFLGHTFLYQYQQIAELTFSNLTNEEWMERENVYAKNSIPKFVKVNATVNCFCGNRKVSKDYGLFITYPLRSEDSLESIAKDTEIEADLLQRYNPGVNFSQGHGIVFIPGKDKNGVYVPFPPSPIKAGHLARSLVTAAISIGGICMLLLLSICIYVKKNIEKSKLTPEDSTAPSTKDGTSDKDSNADTGSKFIVVDKSPEFSYEDLANATNNFSLANKIGQGGFGEVYYGELKGKKTAIKKMTMLATREFLAEMKVLTSVHHRNLVRLIGYCIEGSLFLVYEYMDNGNLSQHLHNSEKEPMTWSTRLQIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNGNFNGKIADFGMTKLTDVASSIDNTDHVAGTFGYMPPENAYGHISRKIDVYAFGVVLYELISAKAAVVKIDKPTTEFKSLEIKTNESIDEYKSLVALFDEVIDQEGDPIEEGLRKLVDPRLGDNYSIDSINKMAQLAKTCINRDPKRRPRMGDVVVSLMKLNSTIDGGSTIVQH* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2226 609 SMART serkin_6 307 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2226 609 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Tpr4g2226 609 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 604 IPR044812 GO:0019199|GO:0045087
Tpr4g2226 609 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 11 604 - -
Tpr4g2226 609 Pfam Protein tyrosine and serine/threonine kinase 309 503 IPR001245 GO:0004672|GO:0006468
Tpr4g2226 609 Gene3D Transferase(Phosphotransferase) domain 1 378 604 - -
Tpr4g2226 609 SUPERFAMILY Protein kinase-like (PK-like) 281 593 IPR011009 -
Tpr4g2226 609 ProSiteProfiles Protein kinase domain profile. 307 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2226 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Tpr4g2226 609 MobiDBLite consensus disorder prediction 259 278 - -
Tpr4g2226 609 Gene3D Phosphorylase Kinase; domain 1 277 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2226 Tpr-Chr4 23304374 23309014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2226 4 599 Receptor kinase-like Gene Family AT3G21630 49.839 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g2226 PK_Tyr_Ser-Thr 4.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2226 - K13429 mtr:MTR_5g086540 829.706