Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2203 ATGACAAGCTCAAGCTGGAAAGCTTCTGATTCCAATCCATGCTCATGGGTTGGTGTTCAATGTGACCATACCAATAATTTGATTTCCCTTAACCTTACTAGTCATGGAATTTTTGGTCAACTTGGATCAGAAATTGGGAACCTTTACAATTTGCAGACCCTTGTATTGTCAGGTAATGGTTTCTCAGGAAAAGTCCCTTTAGAGTTAAGTAACTGTAGTTTGCTTCAGTATTTAGACCTTGAAGGTAATAGATTTAGTGGAAATATACCATATAGTTTTATAAACTTGCAAAATTTACAGTTCATGAGATTGTCTGCCAATATGCTCACTGGCGAAATTCCGGATTCTTTGTTTGAAATTCCTTCCCTGAAAGAACTGAGCCTGCATAGTAATCTTCTTAGTGGCCCTATTCCAACAAGTATCGGAAACTTGACTCAACTATTGAGGTTGTATCTATATGGTAATCAGTTGTCAGGGACTATTCCTTCATCCATTGGTAATTGCAGTAAATTAGAGGACCTAGAATTGTCTTTCAACCGATTGAGAGGTGAAATTCCGAACAGCATTTGGAGAATTCCAAGTCTTGTGAACATATTGGTTCACAACAACAGCCTCTCTGGGGATCTACCTACTGAGATGACAAACCTCAAGTATCTAAAAAATATCTCATTGTTTGATAATCAGTTCTCAGGAGTCATACCTCAAAGTTTAGGAATCAACAGCAGCATAGTGAAGTTGGACTGTATGAATAACAAGTTCAGTGGTAATATCCCGCCAAATCTTTGCTTTGGAAAGAATTTGTGTGAGCTCAATATGGGAATCAATCAACTACAAGGTGCCATACCTTCTGATATAGGAAGATGTAAAACTCTAAAGAGATTGATTCTCGACGAGAATAATTTTAGCGGCCCTCTTCCTTATTTTGAAAGGAATCTGAACCTGAAATACATGGACATAAGCAAGAACAATATCAGTGGACTAATTCCATCAAGTTTGGGAAATTGCACAAGTCTCACATATATTAATTTGTCATGGAACAAATTTGCTGGACTCGTACCATCAGAGCTTGGAAACCTTGTGAATCTTGTGATTTTGGATCTTTCTCATAATAACTTGCAAGGTTCTTTGCCACTTCGGTTGTCAAATTGTACTAAACTGGATCGTTTTGATGTGGGATTCAATTTCCTAAATGGATCACTCCCATCAAGTTTTAGAACTTGGACAGAAATAACCACATTGATTTTAAGAGAAAATCACTTCACAGGAGGTATACCAGGGTTTTTGGCAGAACTTAGCAACCTTCGCGAGTTACAACTTGGTGGAAATTTGTTTGGAGGCAAAATTCCTCGATCGATGGGAAAATTGCATAATTTGTTCTATGGATTGAATCTGAGTGCTAATGGATTGATAGGTGACATTCCTTCAGAAATCAGGAAGCTTGGACTACTTCAAAGTCTGGATATATCCTTGAACAATTTATCCGGAAGCATAGATGCTCTTGAAGATCTTGTTTCATTAATTGAGTTCAATATTTCTTACAATCTCTTCAATGGTTCTGTACCAAAATTTCTAATGAAGTTATTGTATTCCTCGCCATCATCATTCATGGGTAATCCTCTCCTATGTGTCAGTTGTTTGAGTTGCATTAAAACTAGTTATATATATCCATGTGTTGACAAATCAACTGATCACAAAGGTATCAGTAATGTTCAAATTGTAATGATAGAACTTGGATCCTCAATATTGATTTCTGCTATTCTGGTAATAATAATTCAAAGGCATTTCCATACAAAGGAATCAGATACGAAAGATCTAAACCAATGGTATTATATTGATAGAGGAGCTGGAAGGATTGGAGTCAGATATGCTCACGAATCGAACATCTTAGGTGAAGAGAATCCAACCGCCCTTCCGAATCTAGTGTTGCAAGCTACAGAGAACCTAAGTGATCAGTATATTATTGGCAGAGGAGCTCACGGTATTGTGTACAAAGCTTTACTTGGTCAACATGTTTTTGCTGTAAAGAAGTTTGAATTCACAAGGAGAAGGGAAAAGCAACTACGTATGATGCAAAAAGAAATTGAAGTGCTTGGAATGTATAAGCATCGAAACTTAATCAAATACGCAGACTATTGGATTGGAGCTGACTATGGTTTAGTCTTATATGAATTCATAGAAAATGGAAGCCTTCATGATATTTTGCATGAAAAGAATCCCCCACCACCCTTAACGTGGAAAGCCAGGTTTAACATAGCTGTTGGAATTGCTGAAGGAATTGCATATCTGCATAATAATTGTGTCCCACCCATAGTGCATCGAGACATTAAACCAAAAAATATTCTTATTGATGACAATATGGAGCCAATTATAGCTGATTTTGGTACTGCCCTATACAGGAAGTTGTCTGAAGATTCTTATAGTTATTCCGAAACCAGGAAAATGCTTTCAACGATCGTTGTTGGTACCCCTGGCTATATTGCTCCAGAGAATGCATATGTGATAGTGCAGAGCAGAAAGTCTGATGTATATAGCTACGGCATTGTTTTGCTCGAGATAATAACCAGAAAGAGAGTGGTAGTTCCCTGTTTGAATGATGAGTCAAACGTGACCTCTTTAGTGAGCTGGGCTAGATCTGTATGGCTGGAAACAGGAAAAATCGAGTACATTGCTGATCCATACCTTGCAGAAACATTTCCCAATTCAGCAGCACTGACCAAGCAAGTCACATCAATGTTTTTATTGGCATTGCAATGCACAGAGAAGGATCTACGTAAGAGACCAACCATGAAAGATGTTATTGGCTTGTATAAAAGGGACATGTTTAAGTGGTGTGATGAGGAGGAAAACCGTGATGTGATTGCATCTGATACATCATTACAATCATATAGTCCTAATATTTTCCCTATCATTCCAGTTGTCAGCATTGACCACCATATACATGGAGAAAGCAGTAGGGCTGCAGCTCAAAGACAAAGAGAAGTTACATTTACTGTGGAGGCTGAATCCATGGATTATATTGACTTTCGCTTATGGCAGGACTTTGATCAAGTTCGATATGGATTATGTCTTGAAGATGATTGGAGTCGCATACCTACCATTTATATTGATGGACTTTTAGTTAAACTAATGGGAAATGGTAAGATAATGGCTGAAAATGTTTTGGTCGTAGCTGCTATGAATGTTCCAAAAGTAACCTATGTTTGGCCAAGTTTGATTTTCCTTCCTTCTGTCGTTGGTCCAATAGTAACCAAACCTTTCAATTGGTTTTTTCTCTTACGTTGGGGCCAATATATGCACCTTCGTAAATCCTTGTCTTATCAACCCAAATCGTACTTCATAAATGCCAATAAAATCAATGCCCTTCAGGACCTAATACTGGAAGCTACAGAGAACCTAAATGATCGGTATATTATTGGTAGAAAAGCACATTATAGTGTGTACAAAGTCATACTTGGTCAACAAGTGTTTGCTTTAAAGAAGTTTGAATTTGGAAAGAACAAGCAAAAGCAGCTAAGTATCATGTGGAACGAAATTGAAGTCCTTGGAATGTTTAAGCATCGAAATTTAATCACATACACAGACTACTGGATTGGAGGTCATTATGGTTTAGTCTTATGTAAATTCATGGAAAACGGAAGCCTTCAGGATATTTTGCATGAGAAGAAACCCTCACTGCCAATTATGTGGAGCGACCGGTTTAAGATTGCTGTTGGAATTGCTAAAGGTTTGGCACATCTGCATTACAATTGTATGCTACCGTTAATGCACGGAGACATCAATCCAAAGAACATATTTCTTGATGCGAATATGGAGCCTATTATAGCTGATTTTGGTACTGGCCTGATATGGGACCTGTCGAAGGTTTCTTATAGTCACTCTGAAACCAGCCAAATGTTGTCGTTGCACGTTATTGGTACCCCGGGTTATATTGCACCAGAGAATGCATATATAGTGGGGCAAGGAAGAAAGTCTGATGTATATAGCTACGGAGTTGTTTTGCTCGAGCTAATAACCAGAAAGAAAGTGTTTGTTTTCTCTTTGAATGATGCGACAACTTTAGTGAGTTGGGCTAGATCTATATGGCTGGAAACAGGCAAAATTGAGAATATTGTTGATCCATACCTTGCAAATTCATTTCCCAATTCAGCAGCACTAGCCAAACAAGTGACGAAAGTGTTTTTATTGGCATTACAATGCACGGATCGGGACCTACGAAATAGACCGACCATGAAAGATGTTATTGACATGTATAATAGTGACTTGTTTAACTGGAGTCGTGGCGAGGTCGAACATCGTGATGCAGTTGCAGCTAATCATAATGCAAGTGGCCAATTGTTATAA 4341 0.3806 MTSSSWKASDSNPCSWVGVQCDHTNNLISLNLTSHGIFGQLGSEIGNLYNLQTLVLSGNGFSGKVPLELSNCSLLQYLDLEGNRFSGNIPYSFINLQNLQFMRLSANMLTGEIPDSLFEIPSLKELSLHSNLLSGPIPTSIGNLTQLLRLYLYGNQLSGTIPSSIGNCSKLEDLELSFNRLRGEIPNSIWRIPSLVNILVHNNSLSGDLPTEMTNLKYLKNISLFDNQFSGVIPQSLGINSSIVKLDCMNNKFSGNIPPNLCFGKNLCELNMGINQLQGAIPSDIGRCKTLKRLILDENNFSGPLPYFERNLNLKYMDISKNNISGLIPSSLGNCTSLTYINLSWNKFAGLVPSELGNLVNLVILDLSHNNLQGSLPLRLSNCTKLDRFDVGFNFLNGSLPSSFRTWTEITTLILRENHFTGGIPGFLAELSNLRELQLGGNLFGGKIPRSMGKLHNLFYGLNLSANGLIGDIPSEIRKLGLLQSLDISLNNLSGSIDALEDLVSLIEFNISYNLFNGSVPKFLMKLLYSSPSSFMGNPLLCVSCLSCIKTSYIYPCVDKSTDHKGISNVQIVMIELGSSILISAILVIIIQRHFHTKESDTKDLNQWYYIDRGAGRIGVRYAHESNILGEENPTALPNLVLQATENLSDQYIIGRGAHGIVYKALLGQHVFAVKKFEFTRRREKQLRMMQKEIEVLGMYKHRNLIKYADYWIGADYGLVLYEFIENGSLHDILHEKNPPPPLTWKARFNIAVGIAEGIAYLHNNCVPPIVHRDIKPKNILIDDNMEPIIADFGTALYRKLSEDSYSYSETRKMLSTIVVGTPGYIAPENAYVIVQSRKSDVYSYGIVLLEIITRKRVVVPCLNDESNVTSLVSWARSVWLETGKIEYIADPYLAETFPNSAALTKQVTSMFLLALQCTEKDLRKRPTMKDVIGLYKRDMFKWCDEEENRDVIASDTSLQSYSPNIFPIIPVVSIDHHIHGESSRAAAQRQREVTFTVEAESMDYIDFRLWQDFDQVRYGLCLEDDWSRIPTIYIDGLLVKLMGNGKIMAENVLVVAAMNVPKVTYVWPSLIFLPSVVGPIVTKPFNWFFLLRWGQYMHLRKSLSYQPKSYFINANKINALQDLILEATENLNDRYIIGRKAHYSVYKVILGQQVFALKKFEFGKNKQKQLSIMWNEIEVLGMFKHRNLITYTDYWIGGHYGLVLCKFMENGSLQDILHEKKPSLPIMWSDRFKIAVGIAKGLAHLHYNCMLPLMHGDINPKNIFLDANMEPIIADFGTGLIWDLSKVSYSHSETSQMLSLHVIGTPGYIAPENAYIVGQGRKSDVYSYGVVLLELITRKKVFVFSLNDATTLVSWARSIWLETGKIENIVDPYLANSFPNSAALAKQVTKVFLLALQCTDRDLRNRPTMKDVIDMYNSDLFNWSRGEVEHRDAVAANHNASGQLL* 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2203 1446 Gene3D Ribonuclease Inhibitor 313 549 IPR032675 -
Tpr4g2203 1446 ProSiteProfiles Protein kinase domain profile. 1132 1422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2203 1446 Gene3D Transferase(Phosphotransferase) domain 1 1209 1433 - -
Tpr4g2203 1446 Gene3D Transferase(Phosphotransferase) domain 1 725 956 - -
Tpr4g2203 1446 Pfam Leucine rich repeat 313 372 IPR001611 GO:0005515
Tpr4g2203 1446 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Tpr4g2203 1446 SUPERFAMILY Protein kinase-like (PK-like) 1121 1417 IPR011009 -
Tpr4g2203 1446 Gene3D Phosphorylase Kinase; domain 1 1096 1207 - -
Tpr4g2203 1446 Pfam Protein kinase domain 1138 1414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2203 1446 Pfam Protein kinase domain 652 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2203 1446 SUPERFAMILY Protein kinase-like (PK-like) 638 933 IPR011009 -
Tpr4g2203 1446 Gene3D Ribonuclease Inhibitor 138 239 IPR032675 -
Tpr4g2203 1446 ProSitePatterns Protein kinases ATP-binding region signature. 654 676 IPR017441 GO:0005524
Tpr4g2203 1446 ProSiteProfiles Protein kinase domain profile. 648 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2203 1446 Gene3D Ribonuclease Inhibitor 1 137 IPR032675 -
Tpr4g2203 1446 PANTHER OS08G0446200 PROTEIN 1108 1425 - -
Tpr4g2203 1446 PANTHER OS08G0446200 PROTEIN 2 944 - -
Tpr4g2203 1446 SUPERFAMILY L domain-like 7 329 - -
Tpr4g2203 1446 SUPERFAMILY RNI-like 222 530 - -
Tpr4g2203 1446 SMART serkin_6 648 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2203 1446 SMART serkin_6 1132 1422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2203 1446 Gene3D Ribonuclease Inhibitor 240 312 IPR032675 -
Tpr4g2203 1446 Gene3D Phosphorylase Kinase; domain 1 634 724 - -
Tpr4g2203 1446 SMART LRR_typ_2 359 383 IPR003591 -
Tpr4g2203 1446 SMART LRR_typ_2 144 168 IPR003591 -
Tpr4g2203 1446 SMART LRR_typ_2 96 120 IPR003591 -
Tpr4g2203 1446 SMART LRR_typ_2 431 455 IPR003591 -
Tpr4g2203 1446 SMART LRR_typ_2 48 72 IPR003591 -
Tpr4g2203 1446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672|GO:0006468
Tpr4g2203 1446 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 2 944 - -
Tpr4g2203 1446 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1108 1425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2203 Tpr-Chr4 22951513 22957047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2203 27 950 Receptor kinase-like Gene Family AT1G73080 43.834 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g2203 Pkinase 4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2203 - - mtr:MTR_5g087360 2192.16