Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2180 ATGGAATACCTTTATGGAGTTGCGTCTGCTGTTTCAAGAGATTTGGTGTGTGGTGTAATAGGTCAATTACGTTATCCCTGCTGCTTCAACAAATTTGTTCAAGACCTCGCAAAAGAAGAAGGTAATTTGGCTGCAACAAGAGATGGTGTCCAAGACCGCGTTACACAAGCCAAGAAGCAAACTAGGAAGACTGCTGAGGTTGTTGATAGGTGGTTGAAGGATGCTAACCATGTCATGGACGATGTTGATCAGTTACTACAAATGGCAAAAACAGAAAATAACTCATGTCTCGGGCACTGTCCAAATTTGATTTGGCGATACCGTGTAGGCAGGAAGTTAGCAAATAAAAAAAGAGACCTTAAACTGCGCATTGAAGAAGGTAGACAATATATACAGATTGAACGCCCTGCTTCACTTTCAGCAGGCTATTTTTCTTCTGAAAAATGTTGGGAGTTTGATAGTAGAAAACCTGCTTATGAGGAACTTATGCGTGCTTTGGAAGATGATGATGTTACTATGATTGGATTGTATGGGATGGGGGGTTGTGGTAAAACAATGCTTACAATGGAAGTAGGCAAGAGATGTGGTCATCTTTTTGATCAAGTGGTTTTTGTGCCTATATCTAGTACTGTAGACTTGGAAAGGATCCAGGAAAAAATTGCAGGCTCTCTTGAATTTGAATTCCAAGAAAAAGACGAAATGGACAGATCACAACGCTTATGCATGAGGTTCAGACAAGAAGATAGGGTTCTTGTGATTCTGGATGATGTGTGGCAGATGCTAGATTTTGATGCCATAGGGATTCCTTCTAGTGAACATCATAAAGGTTGCAAGGTTCTCATTAGCAGTAGATCTGAAGCAGTTTGTACTTTGATGGATTGCCAGAAAAAAATTCATCTATCAACACTAACCAATGATGAAACGTGGGATCTTTTCCAAAAGCAAGCACTAATATCTGAATGCACTTCGATTACTGTACAGAGTTTGGCAAGACAAATTTCAAATGAATGTAAAGGCTTGCTCGTCGCCATTGTAGCAGTGGCTAGCAGCTTGAAAGGTAAGGCTGAGGTGGAATGGAAGGTTGCATTGAATAGATTGAGAAGTTCGAAACCTGTTAATATCGAAAAAGGTTTGCAAAACCCGTACACATGCTTGCAGTTAAGCTATGATAATCTGGACACTGAAGAGGCCAAGTCACTATTCTTGTTGTGTTCCGTGTTTCCTGAAGATTGTGAAATTCCTGTGGAGTTTTTAACTAGGTCTGCAATAGGGCTAGGCATAGTTGGAGAAGTTCACTCATATGAAGGGGCAAGGGATGAAGTGAGTGTGGCTAAAAATAAGCTCATAAGTTCTTGTTTGTTGCTAGATGTTGATGAAGGAAAATGTGTCAAAATGCATGACTTAGTTCGCAATGTAGCTCATTGGATTGCGCAGAATGAGATTAAATGTGCCTCGGAGAAGGATGTTATGACTTTGGAACATACTTCACTAAGATATCTATGGTGTGAGAAATTTCCAAATAATTTGTATTGTTCCAGTCTTGACTTTCTACACATTCACACACTTACACAAGTATCAGATGAAACTTTCAAAGGAATGGGAATGCTCAGAGTTTTGTTTCTTTACAACAAGGGTCGGGAGAGAATGCCATTGTTGACTACATCGTTAAAATCGTTGACGAATCTTCGTTGCTTACTCCTGAGTAAATGGGATTTAGTTGATATCTCGTTTGTGGGAGATATGAAGAAACTTGAAAGTCTTACATTGTGTTATTGTTCATTCCTTGAATTACCTGATGTTGTTACAGAATTGACTAACTTGAGATTGTTGGATTTGTCAGAATGTGACATGAAAATGAATCCGTTCGAAGTGATTGGGAGACACAGACAGCTGGAAGAATTGTACTTTACTGACTGTAGATCAAAATGGGAAGTTGAATTCTTAAAAGAGTTTAGTGCCCCCCAAGTATTACAGAGGTATCAAATACAATTAGGAAGCATGTTTTTCGGTTTCCAAGAAGCGTTTCTCAATCATCACAGAACTTTGTTTCTCAGTTATTTGGATGTATATAATGCCGCGACCGCGATCAAGGATTTGGCTGAAAAGGCAGAGGTCTTGTGTATAGCCGGTATTGAGGGAGGTGCTAAAAGTATCATGCCTGACATATTTCGAAGTATGAACCATTTAACTGAGCTTTGGATACGCGATTCTAAGGGGATAGAGTGTTTGGTTGACACTTGTCTGATCGAGGTAGGAACTCTCTTCTTCTGCAAGTTGCATTGGTTGAGAATTGAGCACATGGAGCATCTGGGAGCTTTATACAATGGTCGAATGCCTCTAGGTGGCCATTTTGAGAATTTAGAAGACCTATATATAAGCCATTGTCCAAAGCTAACATGTCTCTTCACACTTGCAGTTGCTCAAAATCTGGCACAACTTGAGAAATTACAAGTATTATCTTGCCATGCACTGAAGCATATACTAATTGATGACGATGATGATATAGAGGAGATAATTGTATATGATCACAGACCGTTGTTTCCAAAATTAAAAAGGCTTCATGTTAGAGAGTGTAGTGAGCTGGAATACATAATCCCAATCACGTTAGCTCATGGTCTTGTACTTTTGGAGTGTTTGGAAATCGTATGTAATCAGAAGTTGAGATATATATTTGGCCAAAGCACACACAAAGCTGCTCAGAATCAGAATCAAGTCAAGATCGAGCTGTCGGCCCTGGAAGAGCTTACTCTTGTTATGTTGCCAAATATCAATAGCATTTGTCCCGAAGATTGTTATCTAATGTGGCCATCCCTGCTCAGTTTCAATTTGCGAAATTGTGCAGAGTTTTTCATGGTGTCTATCAATACTTGCATGGCTTTACACAACAATCCGATGATCAATGAAGCCTCGCATCAAACTCTGCAAAATATAAGAGAAGTTCGAGTCAATAACTGTGAGTCAGAAGGCATCTTTCAGCTAGTAGGACTACCCATTGATGGAGAAAAAGATCCACTAATGTCATGTTTGGAAATGTTGTATTTGGAAAATCTACCTCAGCTCAGGTATGTATGTAAGAGTAATGTAGAATCAACAAACATCCAATTCCAAAATCTTCAACAAATGGAGATATGTGGATGTCGAAGATTAAAGTTTATCTTCTCATCCTGTATGGCAGGAGGGCTACCTCAACTGAAAGCGCTAAAGGTAGAAAAGTGCAACCAGCTAGATCAAATCGTTGAGGATATTAGCACTGCAATTCCTTTAGGATCATTTGGCCTTCCCAGCCTTGTAAGGTTAACACTAATATCATGTCCGATGCTGGGTTCACTGTTTACAGCATCCACTGCTAAAACCTTGACTTCATTGGAAGAATTGACAATAGAAGATTGTCATGGTTTAAAACAATTAGTAACTTATGGAAGAACTCTGCAAAATAGAAGGGGAGAAATAGTTCAGGATGATCATCATGACTTTCAGAGTTATGTGTCAATGTTTCAAAGTTTGAAAAGGATTAGTATTATGAGATGTCATTTGCTCAAGTATATATTACCTGTTTCATTTGGAAGAGGACTGGTGAAATTGGAAGCTATAGAAATCACAGATACTCCCGAGTTGAGATATGTATTTGGTCATTCTTCCCATCAATATCCAAACAAGTTCAAAATTGAGCTTCCTGCTTTGGAAAAAGTAGCACTCTACTGTATACCAAATCTGATCGCCATTTGTCCAGAAAACTACCATGCAACATGCTCATCTTTGCAACTTCTTGTCATGAATGATGTTGGTCTATCAATGAATAATTGGATGGTTGATTCTGGAGCCGCACACTCAGATCTTAGTTCTACTAAAACAGATGAAGGAGAAACAAGTATGCCTATTGAGAAGAAGTTAACGTCTGTTATTATTGAGAACGGATCCGAAATGGAAGGCATTTTTCAAATGAAGGGATCCCCAAGTGAGAATGGACAACAAGTAATGTCTTGGTTAGAAGACCTTAAATTGAACAATTTGCCAAAGCTAATGTACATATGGATGGGTTCCATACAACATTGTGTGAGCCTTCAACATCTTTACAAAATACATATTTGCAATTGTCCAACACTAAAATCTATCTTCTCCATCTCTGTCTTGAGAGTCCTGCCTCTGTTGAAGATCCTAGTGCTAGAACAATGTGAAGAATTGGAGCAAATCATTGAAGATGATGACGAAGAAAATGAAAATGTCCCGAATCCTCAAGTGTGGTTCTCGCAGCTAAAGTTTCTTCTTGTCACCCAATGCAACAAATTGAAGCATTTGTTTTCTTTCCACACATCCCATGAATTTCCAGAATTGGAATATCTGACCCTCAATCAAAATTCTAGTCTAGTTCAAGTGTTTAAAGTAGTTTCTGGTGTGCGAGAAGGGACAATGGAAATTTTGCTTCCAAAACTGAAACATGTAATGCTAATGCAACTGCCAAACCTCAATAATATATGTCAAGGGATTGAGTTTCAGACTCTCACCAATCTTTTGGTGCACAATTGCCCAAAATTCTTACTAACTTCAACGACTACTAACGAGGACATGCTACAAACCTGTGATAGTGACAAGGAAATTGGTTTCTATCTCCGTCCACACTTACATGACATAAGTTGTACAACAACAAATGACCACGAGTTCCTTACATCAAAGATCAAAAACAAAGGGATACATGATTTACAATCACAGGAGCAGAAACTGTCACTCATTCCTTTACCAAACTTGACAGAGGAGTTTGTTAAAGGACAATCAATTGATGAACCTTATTTGACGAGACAACAAAAGCCACTTGGAGAATCTAGGGTTACTGAAGAGGAAACAGCATCAAAGAATGCGGATATAGTAGCTTTGTCAATTCATTCTGAATCTGATAGCTCACATTCAAGTCCATTAGCTACCTCTCAAAGTAGGTCACATCCACATTATGAAATCAGCTTCAGCCAAACCGAGACTTACACTAATAAAGAAAACAAAGACCGTCCTGTATATATAGGTGACTCGGAGGACAATGATCTCAAACCTGTCAAAGAAGATGATGAAAGTCAAATAGCCACACCTTGTGTTTCTGAAGCAACTGCAGTGTGTCATTCAACCGAATATAACTTCGTTGAAAAGGCTCTTTCTGACCTGGAAGAGTCTTTGAGGATACCTCTAAGGGACATAGCTAGCTCAGAGGCAAACAGCCTTCGCCTTCTAACGACTCTTAACTTCTTGTCCCACCTTTCTTTAAAAGATGTAGCTCTATCAGATGGACTCCAAGCTGTAATCGACACTATGCACACAGAATTCCCAACCATCCTACGCTCCTTCAAGCAAGCCTTTTCTATCACAGACAAATTTGCTATGACTGATGCTCATCATGACGAGGTAGCCATTACTCTTGCTTCCAAAATTTCCAACGCGGAAAGTTTTTTGAATGAAGCTCAACAGAGGGAAGCAGCTTTAAAGGAACAGATCATTCAATTGGAGAAAGAAGTAAAATGTCTTCAAGAGGAAAATGAAAAATGCATTCAAGAAACTATAGGCTACAAAATGGAGTTGGAGAATGTGGTCAAAGACAAGTATGAAATTTTGGAAGATCAAATGAAAGCTCGGCAACAAATATTTGAGGTCGATTATAAATGGTCTGCTTTACTTAGTCAGTTTCAGTACAACCACATTGTTGCAAGAAATCCTTCTTGA 5700 0.3893 MEYLYGVASAVSRDLVCGVIGQLRYPCCFNKFVQDLAKEEGNLAATRDGVQDRVTQAKKQTRKTAEVVDRWLKDANHVMDDVDQLLQMAKTENNSCLGHCPNLIWRYRVGRKLANKKRDLKLRIEEGRQYIQIERPASLSAGYFSSEKCWEFDSRKPAYEELMRALEDDDVTMIGLYGMGGCGKTMLTMEVGKRCGHLFDQVVFVPISSTVDLERIQEKIAGSLEFEFQEKDEMDRSQRLCMRFRQEDRVLVILDDVWQMLDFDAIGIPSSEHHKGCKVLISSRSEAVCTLMDCQKKIHLSTLTNDETWDLFQKQALISECTSITVQSLARQISNECKGLLVAIVAVASSLKGKAEVEWKVALNRLRSSKPVNIEKGLQNPYTCLQLSYDNLDTEEAKSLFLLCSVFPEDCEIPVEFLTRSAIGLGIVGEVHSYEGARDEVSVAKNKLISSCLLLDVDEGKCVKMHDLVRNVAHWIAQNEIKCASEKDVMTLEHTSLRYLWCEKFPNNLYCSSLDFLHIHTLTQVSDETFKGMGMLRVLFLYNKGRERMPLLTTSLKSLTNLRCLLLSKWDLVDISFVGDMKKLESLTLCYCSFLELPDVVTELTNLRLLDLSECDMKMNPFEVIGRHRQLEELYFTDCRSKWEVEFLKEFSAPQVLQRYQIQLGSMFFGFQEAFLNHHRTLFLSYLDVYNAATAIKDLAEKAEVLCIAGIEGGAKSIMPDIFRSMNHLTELWIRDSKGIECLVDTCLIEVGTLFFCKLHWLRIEHMEHLGALYNGRMPLGGHFENLEDLYISHCPKLTCLFTLAVAQNLAQLEKLQVLSCHALKHILIDDDDDIEEIIVYDHRPLFPKLKRLHVRECSELEYIIPITLAHGLVLLECLEIVCNQKLRYIFGQSTHKAAQNQNQVKIELSALEELTLVMLPNINSICPEDCYLMWPSLLSFNLRNCAEFFMVSINTCMALHNNPMINEASHQTLQNIREVRVNNCESEGIFQLVGLPIDGEKDPLMSCLEMLYLENLPQLRYVCKSNVESTNIQFQNLQQMEICGCRRLKFIFSSCMAGGLPQLKALKVEKCNQLDQIVEDISTAIPLGSFGLPSLVRLTLISCPMLGSLFTASTAKTLTSLEELTIEDCHGLKQLVTYGRTLQNRRGEIVQDDHHDFQSYVSMFQSLKRISIMRCHLLKYILPVSFGRGLVKLEAIEITDTPELRYVFGHSSHQYPNKFKIELPALEKVALYCIPNLIAICPENYHATCSSLQLLVMNDVGLSMNNWMVDSGAAHSDLSSTKTDEGETSMPIEKKLTSVIIENGSEMEGIFQMKGSPSENGQQVMSWLEDLKLNNLPKLMYIWMGSIQHCVSLQHLYKIHICNCPTLKSIFSISVLRVLPLLKILVLEQCEELEQIIEDDDEENENVPNPQVWFSQLKFLLVTQCNKLKHLFSFHTSHEFPELEYLTLNQNSSLVQVFKVVSGVREGTMEILLPKLKHVMLMQLPNLNNICQGIEFQTLTNLLVHNCPKFLLTSTTTNEDMLQTCDSDKEIGFYLRPHLHDISCTTTNDHEFLTSKIKNKGIHDLQSQEQKLSLIPLPNLTEEFVKGQSIDEPYLTRQQKPLGESRVTEEETASKNADIVALSIHSESDSSHSSPLATSQSRSHPHYEISFSQTETYTNKENKDRPVYIGDSEDNDLKPVKEDDESQIATPCVSEATAVCHSTEYNFVEKALSDLEESLRIPLRDIASSEANSLRLLTTLNFLSHLSLKDVALSDGLQAVIDTMHTEFPTILRSFKQAFSITDKFAMTDAHHDEVAITLASKISNAESFLNEAQQREAALKEQIIQLEKEVKCLQEENEKCIQETIGYKMELENVVKDKYEILEDQMKARQQIFEVDYKWSALLSQFQYNHIVARNPS* 1900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2180 1899 MobiDBLite consensus disorder prediction 1670 1689 - -
Tpr4g2180 1899 SUPERFAMILY RNI-like 495 884 - -
Tpr4g2180 1899 MobiDBLite consensus disorder prediction 1596 1615 - -
Tpr4g2180 1899 MobiDBLite consensus disorder prediction 1670 1686 - -
Tpr4g2180 1899 Gene3D - 302 388 IPR042197 -
Tpr4g2180 1899 PRINTS Disease resistance protein signature 173 188 - -
Tpr4g2180 1899 PRINTS Disease resistance protein signature 244 258 - -
Tpr4g2180 1899 PRINTS Disease resistance protein signature 337 351 - -
Tpr4g2180 1899 PRINTS Disease resistance protein signature 602 618 - -
Tpr4g2180 1899 Coils Coil 1804 1845 - -
Tpr4g2180 1899 MobiDBLite consensus disorder prediction 1626 1647 - -
Tpr4g2180 1899 Pfam NB-ARC domain 160 391 IPR002182 GO:0043531
Tpr4g2180 1899 Gene3D Ribonuclease Inhibitor 472 668 IPR032675 -
Tpr4g2180 1899 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 973 1134 - -
Tpr4g2180 1899 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1353 1511 - -
Tpr4g2180 1899 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 23 949 - -
Tpr4g2180 1899 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1116 1373 - -
Tpr4g2180 1899 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 404 IPR027417 -
Tpr4g2180 1899 CDD AAA 176 283 - -
Tpr4g2180 1899 PANTHER - 1116 1373 - -
Tpr4g2180 1899 PANTHER - 1353 1511 - -
Tpr4g2180 1899 PANTHER - 23 949 - -
Tpr4g2180 1899 PANTHER - 973 1134 - -
Tpr4g2180 1899 Gene3D - 389 471 IPR036388 -
Tpr4g2180 1899 Gene3D Ribonuclease Inhibitor 1276 1470 IPR032675 -
Tpr4g2180 1899 Gene3D Ribonuclease Inhibitor 716 908 IPR032675 -
Tpr4g2180 1899 Gene3D Ribonuclease Inhibitor 968 1154 IPR032675 -
Tpr4g2180 1899 Gene3D - 145 299 IPR027417 -
Tpr4g2180 1899 SUPERFAMILY RNI-like 1009 1392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2180 Tpr-Chr4 22638501 22649997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2180 170 639 WRKY Transcription Factor Family AT5G45050 23.384 2.45e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2180 - - cam:101501248 2952.54