Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2164 ATGACAAGATATTTGCGTGACCACCGGGGAGTTTTTGTCGCGGCTGGAACCAATTGGTTTGAAGGAAATTGCGCCATTGTCGAAGGTGAATCGATTGCCTTACTAGAAGCATTGAAAGAAATAGCAGAAAGAGGTATATCAAACGTTATTTTTGAAATGGATTCGAAGAGTGTAGTGGATGCAATTCACAATATAAAAAGTGGTAGCTCAGATTTTAGTTCACTCATTTGTCATGTTAAGCATGTATTGTTATCTAATCCAAACTTTGTGGTAAAGTTTATTAATCGACAAGCGAATATGGTGGCTCACACGAAAATGGTTGCATACATGGATGCTGCAAGAACATATACAGGATTAAAGCCAGCTCCAATTATTATGGCTGGATTCTCATCTAGGGGTCCTAGTGTTGTGCAGCCATTGATACTTAAGCCTGACATAACTGTTCCTAGAGTCAACATATATGGCTGCTTATTCACAGGCCGCTAG 486 0.3971 MTRYLRDHRGVFVAAGTNWFEGNCAIVEGESIALLEALKEIAERGISNVIFEMDSKSVVDAIHNIKSGSSDFSSLICHVKHVLLSNPNFVVKFINRQANMVAHTKMVAYMDAARTYTGLKPAPIIMAGFSSRGPSVVQPLILKPDITVPRVNIYGCLFTGR* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2164 161 Gene3D Peptidase S8/S53 domain 118 155 IPR036852 GO:0004252|GO:0006508
Tpr4g2164 161 SUPERFAMILY Ribonuclease H-like 21 103 IPR012337 -
Tpr4g2164 161 CDD RNase_H_like 5 103 IPR044730 -
Tpr4g2164 161 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 97 154 IPR045051 -
Tpr4g2164 161 Pfam Reverse transcriptase-like 5 104 IPR002156 GO:0003676|GO:0004523
Tpr4g2164 161 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 97 154 - -
Tpr4g2164 161 Gene3D - 100 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2164 Tpr-Chr4 22502423 22503526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2164 105 160 Subtilisin-like Serine Gene Family AT2G04160 55.357 6.70e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2164 - - gmx:100794135 75.0997