LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g2163	ATGTCATCTTCTATCACCAAACTTTTTCTATCATCATTCATTCTTTGCAGTTTCTTGCAAGAACACACTCATGCCATTAGAAAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCTTCCCTTGATGATCTTGAATTAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGCCATGAGAAGGCAAAGGAAACAGTTATGTATTCATACAATAAGCACATAAATGGATTTGCTGCATTACTTGAAGATGAAGAGGCAACAAAGATTGCAAAGAACTCAAATGTAGTTTCTGTTTTCTTGAGCAAAGAATATAAATTGCACACTACTAGGTCATGGGAATTTCTTGGACTGGAAAAATATGGTGGAATTTCTCTTGATTCTGCTTGGTGGATGGCCAGATTTGGTGAAGATACAATCATGGCTAATTTAGATTCAGGTGTTTGGCCAGAACATGAAAGTTTCAGTGGCATTGGATATGGTCCAGTTCCATCAAAGTGGCGTGGGAATGGAGTATGTGAGATTGATCATTTTATTACTACTTCAAATACTTCAACAACATTCTGCAATAGGAAGCTAATTGGAGCAAGAATATTCAGTAAAAACTACGAAGCACAATTTGGAAAACTCAATCCCTCAAACCTCACAGCGCGTGACTTTGTTGGCCACGGTACACACACCTTATCAACAGCCGCGGGTAACTTTTCACCCAATGTAACAATATTTGGTAACGGTAATGGCACAGCAAAAGGTGGATCCCCTAGAGCGCGTGTTGCAGCCTACAAAGTGTGTTGGTCAAAAACAGACGCAGGTGGATGTCACGAAGCTGATATTCTAGAAGCATTTGATCATGCTATATATGATGGTGTTGATGTCATTTCAATCTCTTTGGGTGGTTTTGATCCATATATTGAAGCTTTGTTCACCGATGGAATTTCAATTGGGTCATTTCACGCTGTTGCTAAGAATGTTGTGGTTATTTGTTCTGCTGGAAATGATGGACCAGCTCCTAGAACTGTTACAAATGTAGCACCTTGGTCTTTTACGGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGTCACGTTTTAATTGGTCACAAACATTACATGAAGGGTGCTAGTCTTAGTAAAGGCTTACCAACAGGTCCATCGAAGAAAAAGAAAATATATCCGATGATTCATTCTATCGATGCTAGATTTCCTAATGCCACAATTCAAGATGCCCGTTATTGCAAGCCTAGAACACTTGATCCTACCAAAGTAAAGGGAAAGATATTAGTTTGCATTCGACTTGACGACACAACATCAATTGCTCAAGGCTTTGAAGCAGCTGTTGCAGGTGCAGTCGGAGTTTTTGTGATGAATGATAAGAACAGTGGAAATGTACTTCTAGCTGAGCCTCATCCTTTACCTGGTGCAAGTATGGATAGCAATGAAGATGAAGATATTGATGAACGTGAATGGTTCGGAAAAGGTGGTACTGACGAGAACATAACCAGGAAAATGATTGCATACATGGATGCTGCAAGAACATATACAGGATTAAGGCCAGCTCCAATTATGGCTGGATTCTCATCTAGGGGTCCTAGTGCTGTGCAGCCATTGATACTTAAGCCTGACATAACTGCTCCTGGAGTCAACATATTGGCTGCTTATTCACAAGCCACTAGTCCTTCCAATCTACCATCAGATACACGTCGAGTTCCTTACAATCTGCAACAAGGAACTTCTATGTCTTGTCCTCACGTTGCTGGAATTGCTGGTCTTCTCAAGACACTTCATCCTAATTGGAGTCCAGCCGCTATCAAATCAGCCATCATGACTACCGCTACCACAATAGATAACACCAATCAACTGATTCGGAATGCATTTGATAAGATATCAACTCCATTTGAATATGGTTCTGGGCATATTCAACCTAACCTTGCAATGGATCCAGGACTTGTTTATGATCTAACCACAACCGATTACTTGAACTTCATATGTGCTTCTGGTCACAATCAAAACTTACTCAAGTTCTTCAATAACAACTCTTACACTTGTCCCGAGTCTTACAATATCGAAAATCTCAACTATCCTTCAATTACCGTAACTAATCGAGGATTAAACCCTATAAATGTTACTCGTACTGTTACAAATGTTGGGTCTCCTAGCACATATATTGTTGAAACTAGCCAACTTGAAGAATTTAAGGTTCATGTTCAACCAAGTTCCTTGACTTTTAAGAAAATTGGAGAAAAGAAGACCTTTCAGGTAATTATGGAGGCAATTGGTTGGCCTTATCATGGTTTTCCGGTGTTTGGGAAATTGACATGGACAAATGGCAAACGCAAAGTTACTAGTCCTATTGTAGTTCTTTAA	2382	0.3946	MSSSITKLFLSSFILCSFLQEHTHAIRKTYIVYLGGHSHGPNPSLDDLELATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEATKIAKNSNVVSVFLSKEYKLHTTRSWEFLGLEKYGGISLDSAWWMARFGEDTIMANLDSGVWPEHESFSGIGYGPVPSKWRGNGVCEIDHFITTSNTSTTFCNRKLIGARIFSKNYEAQFGKLNPSNLTARDFVGHGTHTLSTAAGNFSPNVTIFGNGNGTAKGGSPRARVAAYKVCWSKTDAGGCHEADILEAFDHAIYDGVDVISISLGGFDPYIEALFTDGISIGSFHAVAKNVVVICSAGNDGPAPRTVTNVAPWSFTVAASTIDREFVSHVLIGHKHYMKGASLSKGLPTGPSKKKKIYPMIHSIDARFPNATIQDARYCKPRTLDPTKVKGKILVCIRLDDTTSIAQGFEAAVAGAVGVFVMNDKNSGNVLLAEPHPLPGASMDSNEDEDIDEREWFGKGGTDENITRKMIAYMDAARTYTGLRPAPIMAGFSSRGPSAVQPLILKPDITAPGVNILAAYSQATSPSNLPSDTRRVPYNLQQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTATTIDNTNQLIRNAFDKISTPFEYGSGHIQPNLAMDPGLVYDLTTTDYLNFICASGHNQNLLKFFNNNSYTCPESYNIENLNYPSITVTNRGLNPINVTRTVTNVGSPSTYIVETSQLEEFKVHVQPSSLTFKKIGEKKTFQVIMEAIGWPYHGFPVFGKLTWTNGKRKVTSPIVVL*	794

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g2163	793	Pfam	Subtilase family	142	620	IPR000209	GO:0006508\|GO:0008236
	Tpr4g2163	793	Gene3D	-	362	520	-	-
	Tpr4g2163	793	Gene3D	-	668	793	-	-
	Tpr4g2163	793	PANTHER	SUBTILISIN-LIKE SERINE PROTEASE	18	793	-	-
	Tpr4g2163	793	PRINTS	Subtilisin serine protease family (S8) signature	142	161	IPR015500	-
	Tpr4g2163	793	PRINTS	Subtilisin serine protease family (S8) signature	225	238	IPR015500	-
	Tpr4g2163	793	PRINTS	Subtilisin serine protease family (S8) signature	581	597	IPR015500	-
	Tpr4g2163	793	CDD	PA_subtilisin_like	369	490	-	-
	Tpr4g2163	793	ProSitePatterns	Serine proteases, subtilase family, serine active site.	582	592	IPR023828	-
	Tpr4g2163	793	Gene3D	Peptidase S8/S53 domain	144	664	IPR036852	GO:0004252\|GO:0006508
	Tpr4g2163	793	Pfam	Fibronectin type-III domain	696	792	IPR041469	-
	Tpr4g2163	793	SUPERFAMILY	Subtilisin-like	113	655	IPR036852	GO:0004252\|GO:0006508
	Tpr4g2163	793	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	18	793	IPR045051	-
	Tpr4g2163	793	ProSiteProfiles	Serine proteases, subtilase domain profile.	118	651	-	-
	Tpr4g2163	793	Pfam	Peptidase inhibitor I9	29	114	IPR010259	-
	Tpr4g2163	793	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	16	114	IPR037045	-
	Tpr4g2163	793	CDD	Peptidases_S8_3	111	618	IPR034197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g2163	Tpr-Chr4	22494399	22500383	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr4g2163	29	792	Subtilisin-like Serine Gene Family	AT2G04160	51.760	0.0	769

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g2163	-		-	gmx:100794135	1225.31