Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2155 AATCTAATCTTCACACTGTGTCACGTCACTGATTGTTGTGTATTCTGCTTTGGAACTACTGTTTCAGATGACTTTGGTTTTAAGCACATACTCTGGGTCTATAGTGGACGTAGAGGTGTTCATTGTTGGGTGTGTGATGGGAAGGCAAGAAGGTTGACTAACGAGCAAAGAGCTTCTATTGCTGACTATTTTCGTGTTTACAAGGGCAATGAAAAAAGTCATAACAAGGTTTCCTTGATGGGTGCTGCGCTTCATCCTTTCTTGGCGACTTCATACACCAATGTTCTCAAGGACTATTTTGAGAAAATATTGCTTACTAATCAAAACTTACTTGCTACTGAGGAGAGATATGAAAAGATCCTAAGCATGATTCCTGATGAATCTATTGCTTCTGAACTTAGGGGAAGATGGCAAGATAATATATAA 426 0.3897 NLIFTLCHVTDCCVFCFGTTVSDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRASIADYFRVYKGNEKSHNKVSLMGAALHPFLATSYTNVLKDYFEKILLTNQNLLATEERYEKILSMIPDESIASELRGRWQDNI* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2155 141 PANTHER DNA PRIMASE 17 139 - -
Tpr4g2155 141 PANTHER DNA PRIMASE SMALL SUBUNIT 17 139 IPR014052 GO:0003896|GO:0006269
Tpr4g2155 141 SUPERFAMILY Prim-pol domain 10 128 - -
Tpr4g2155 141 Pfam DNA primase small subunit 22 139 IPR002755 GO:0003896|GO:0006269
Tpr4g2155 141 Gene3D DNA primase, PRIM domain 6 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2155 Tpr-Chr4 22404832 22407811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2155 7 140 Core DNA Replication Machinery Family AT5G41880 55.556 2.14e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2155 K02684 - gmx:100780574 234.572