Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2137 ATGAAAACAACCAAATTCATATCATCATTTTTATTCTTATTATTACTAGCCACTAAATCTTTCATAACAGAATCAAAATGTAGCAAAACTTGTGACAGAGCTTTAGCTTCATATTATCTAACAAATGATTCATCTTCAAATCTAACATATGTTTCAAAAATCATGCAATCAAACCTTGTTACAAAACCAGAAGATATTGTCAGTTACAACACAGACACAATAAAAAGCAAAGATTCTGTTCAATCTTTTACAAGAGTTAATGTTCCATTTCCTTGTGATTGCATCAATGATGAGTTTCTTGGTCACACATTTCAATACCATGTTGTTAAAGGAGATACATATTTGTCTGTTGCAAACAATAGTTATTCCAATTTAACAACTGCTGAGTTTTTGCATAGTTTCAATAGCTATGATTCAAATGATATTCCTGATACTGCAACTCTTAATGTTACTGTTAATTGTTCTTGTGGGAATAGTGATGTTTCTAAGGATTATGGTTTATTTGTTACATACCCTCTTAGAAGTGAAGATTCTTTGCAATTGATTTCTAATAAGACTAAGATTGATGCTGAGTTGCTGCAAAAGTATAATCCTGGTGTCAATTTTAGTCAAGGGAGTGGCTTGGTTTATATTCCTGGAAAAGACCAAAATGGTAACTACGTTCCTTTTCACACAAGCACTTCAGGCCTATCAGGTGGAGTTATCGCTGGAATATCTATTGGAGCAGTAGCAGGACTATTGCTATTCGCATTTTGTATTTACCTTTCATATTCCCGAAAGAAGAAAGTACGGATGCAAACTTTGCACTCAGAAGAGTCCGGCGCGATCTTCGCTCAAGTTAAGAATGATGAAGTCTCTGGTAATGCTACATATGGAACTTCAGATTCTGCGAGTCCTGCTAATATCATCGGCATTAGGGTGGAAAAATCAGGGGAGTTTTCATATGAAGAACTAGCCAATGCCACAAATAACTTCAATATGGCTAATAAAATCGGTCAAGGTGGTTTCGGTGAAGTGTTTTACGCAGAACTGAACGGCGAGAAAGCTGCAGTAAAAAAGATGGATATGAAAGCATCAAAAGAATTTCTTGCTGAGCTTAAGGTTTTGACGCGTGTTCATCACTTGAACCTGGTACGATTGATTGGATATTGCGTCGAGGGATCCCTTTTCCTTGTCTATGAATACATTGATAATGGAAACTTAAGCCAACATCTACGAAGTTCAGATGGAGAACCTTTGCAATGGTCTACTAGGACTAAAATTGCTCTGGATTCAGCTAGAGGTCTTGAATACATTCATGAACATACCGTGCCTACATATATTCATCGCGACATAAAGTCAGAAAATATTTTATTAGACAAAAACTTCCGTGCTAAGGTTGCAGATTTTGGATTAACTAAGCTGATTGAAGCTGGAATTTCATCAGTTCCAACTGCTAATATGGCAGGCACATTTGGTTACATGCCACCAGAATATGCATATGGTAGTGTTTCTTCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTATATGAACTAATTTCAGCTAAAGGAGCTATAATAATGGGTGCTGAATTAAAGGGTCTTGTAACTTTGTTTGATGAAGTTTTTGATGGTCCAAATCCTATAGAAGGTCTTAAAAAACTGGTGGATCCTAGGCTTGGAGATAACTATTCAATTGATTCCATTTTCAAGATGGCACAAATTGCGAAAGTATGTACTGAGAGTGATCCAAAACAACGTCCAAATATGAGTTCTGTTGTAGTTGCTCTTACCACATTAACTTCAACTACTGAGGATTGGGATATTAATTCTATATATAAAAATCCAAATCTTGTAAATTTAATGTCTGGAAAGTAG 1860 0.3554 MKTTKFISSFLFLLLLATKSFITESKCSKTCDRALASYYLTNDSSSNLTYVSKIMQSNLVTKPEDIVSYNTDTIKSKDSVQSFTRVNVPFPCDCINDEFLGHTFQYHVVKGDTYLSVANNSYSNLTTAEFLHSFNSYDSNDIPDTATLNVTVNCSCGNSDVSKDYGLFVTYPLRSEDSLQLISNKTKIDAELLQKYNPGVNFSQGSGLVYIPGKDQNGNYVPFHTSTSGLSGGVIAGISIGAVAGLLLFAFCIYLSYSRKKKVRMQTLHSEESGAIFAQVKNDEVSGNATYGTSDSASPANIIGIRVEKSGEFSYEELANATNNFNMANKIGQGGFGEVFYAELNGEKAAVKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLSQHLRSSDGEPLQWSTRTKIALDSARGLEYIHEHTVPTYIHRDIKSENILLDKNFRAKVADFGLTKLIEAGISSVPTANMAGTFGYMPPEYAYGSVSSKIDVYAFGVVLYELISAKGAIIMGAELKGLVTLFDEVFDGPNPIEGLKKLVDPRLGDNYSIDSIFKMAQIAKVCTESDPKQRPNMSSVVVALTTLTSTTEDWDINSIYKNPNLVNLMSGK* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2137 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Tpr4g2137 619 Pfam Protein tyrosine and serine/threonine kinase 326 590 IPR001245 GO:0004672|GO:0006468
Tpr4g2137 619 Gene3D Phosphorylase Kinase; domain 1 299 395 - -
Tpr4g2137 619 PANTHER LYSM RECEPTOR KINASE 1B 8 619 - -
Tpr4g2137 619 Gene3D Transferase(Phosphotransferase) domain 1 396 611 - -
Tpr4g2137 619 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Tpr4g2137 619 ProSiteProfiles Protein kinase domain profile. 325 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2137 619 SMART serkin_6 325 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2137 619 SUPERFAMILY Protein kinase-like (PK-like) 307 591 IPR011009 -
Tpr4g2137 619 CDD STKc_IRAK 331 588 - -
Tpr4g2137 619 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 619 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2137 Tpr-Chr4 22208028 22213208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2137 13 619 Receptor kinase-like Gene Family AT3G21630 55.645 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g2137 PK_Tyr_Ser-Thr 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2137 - K13429 mtr:MTR_5g086030 1039.64