Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2136 ATGTGGGTCCATTTCCAGACCAACATGGCAAGTTATCAACATGATTGTCCATGTATTATTCATAACACCCAATTTCTTATTCTGTGTTCCTATTGTACAATCATGAAACCAATCAAATTCAGATTATTACTTCTACTCTTGTTACTGGCCTTTACTGCAGAATCATACTGCACCAAAACTTGTGACGTAGCTTTAGCTTCCTACAATATACAAATAGGTTCAAACTTAACATATATTTCATCCATCATGATATCCAAGGTTGTTTCAGAACCTGAAGATATTTTCAGCTACAACAAGGACACATTACAAAGCCCAAATAGTCTCCTAGGCGATTCGAGAGTGAATGTTCCCTTCACTTGTGATTGCATCAATAATGAGTTTCTTGGTCACACTTTTCTATATGAGCTTCACCAAGGAGATACCTATGCTTCAATTGCTGCATTCACTTTTAGCAATTTGACTAATGAGGAGGGGATGCAAAGATTCAACGTTTATAGTCCAGATAATATTCCTGTTGATGGAACTCTTAATGTTACTGTTAACTGTTCATGTGGGAATAGAGAGGTTTCTAAGGATTATGGTTTGTTCATCACATACCCTCTTACTTCTAAGGACACTTTGGAGTCTATTGCAAAGGATACCAAACTTGATGCTGAGTTGCTTCAGAGGTACAACCCTGGCGTGAATTTCAGCCAAGGAACTGGTCTTGTTTTTATTCCAGGAAAAGGAAGCGGAGCTATTGCCGGAATATCTGTTGGAGTACTAGCAGGGATTTTACTATCGTCGTTTGGTGTGTATGTTAAATATTACCTAAAGAAGAAAGCATGGAAGAAAAATTTGACCTTAGATGATTCCAAGATGATGAACTCAGCTCAAATTGGTACCGAAATCACAGGCCTTTTGGTGGAAAAATCACAAGAGTTTTCATACAAAGAACTTTCCATTGCCACAAATAAGTTCAGCATGTCTAATAAAATCGGTGAAGGCGGTTTTGGAGAAGTCTTCTATGCAGAGCTGAGAGGCCAGAAAGCCGCAATCAAGAAGATGAGGATGAAAGCATCCAAGGAATTTTGTGCTGAATTGAAAGTCTTAACTTGTGTTCATCACTTGAACCTAGTAGGTTTGATTGGATATTGTGTTGAAGGTTTTCTCTTCCTTGTCTATGAATACATTGACAATGGAAACTTAAGTCAAAATCTCCGCGATTCAGAAAGAGAATCTTTGACGTGGTCTACAAGGATGCAAATCGCGCTGGATTCAGCTAGAGCTCTTGAATATATTCATGAACATACCGTACATGGATATATCCATCGCGACATAAAGTCAGAAAATATTTTACTAGACAAAAGGTTTCGTGCAAAGGTTACAGATTTTGGATTATCCAAGTTTGCTGACGTTGAAAATTCAACTTCATCTAATAAGATCGTGCAGGGTACATTCGGTTACATGCCACCAGAATACGCGCGTGGTGGTGTTGCTCCTTCTCCAAAAATCGATGTCTATGCCTTTGGAGTTGTTCTATATGAACTTATTTCTGCTAAACAAGCTGTAATCCGTGATGGACCTGAAGTAAAAGGCCTTGTAGCTTTGTTTGATGAAGTGTTTGATCATGAAACAAATCCGACAGAAGCTCTGAAAAATCTGGTGGATCCTAGACTTGGAGATAACTACTCAGTTGATTCAGTTTGCAATATAGCAAAACTAGCCAAAGCATGTACAATGAAGGATCCACAATTTCGTCCAAGCATGAGATCTGTTGTGGTTGCTCTTACGACACTAACTTCTACTACTGAGGATTGGAATGTTTCATCTTTTTTTGAAAATCCAGCTTTTGTAAATTTAATGTCCGGAAAATAG 1857 0.3823 MWVHFQTNMASYQHDCPCIIHNTQFLILCSYCTIMKPIKFRLLLLLLLLAFTAESYCTKTCDVALASYNIQIGSNLTYISSIMISKVVSEPEDIFSYNKDTLQSPNSLLGDSRVNVPFTCDCINNEFLGHTFLYELHQGDTYASIAAFTFSNLTNEEGMQRFNVYSPDNIPVDGTLNVTVNCSCGNREVSKDYGLFITYPLTSKDTLESIAKDTKLDAELLQRYNPGVNFSQGTGLVFIPGKGSGAIAGISVGVLAGILLSSFGVYVKYYLKKKAWKKNLTLDDSKMMNSAQIGTEITGLLVEKSQEFSYKELSIATNKFSMSNKIGEGGFGEVFYAELRGQKAAIKKMRMKASKEFCAELKVLTCVHHLNLVGLIGYCVEGFLFLVYEYIDNGNLSQNLRDSERESLTWSTRMQIALDSARALEYIHEHTVHGYIHRDIKSENILLDKRFRAKVTDFGLSKFADVENSTSSNKIVQGTFGYMPPEYARGGVAPSPKIDVYAFGVVLYELISAKQAVIRDGPEVKGLVALFDEVFDHETNPTEALKNLVDPRLGDNYSVDSVCNIAKLAKACTMKDPQFRPSMRSVVVALTTLTSTTEDWNVSSFFENPAFVNLMSGK* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2136 618 Gene3D Transferase(Phosphotransferase) domain 1 391 608 - -
Tpr4g2136 618 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 39 618 IPR044812 GO:0019199|GO:0045087
Tpr4g2136 618 SUPERFAMILY Protein kinase-like (PK-like) 302 590 IPR011009 -
Tpr4g2136 618 ProSiteProfiles Protein kinase domain profile. 320 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2136 618 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Tpr4g2136 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Tpr4g2136 618 Pfam Protein tyrosine and serine/threonine kinase 321 589 IPR001245 GO:0004672|GO:0006468
Tpr4g2136 618 PANTHER LYSM RECEPTOR KINASE 1B 39 618 - -
Tpr4g2136 618 Gene3D Phosphorylase Kinase; domain 1 293 390 - -
Tpr4g2136 618 SMART serkin_6 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2136 Tpr-Chr4 22192500 22196637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2136 43 618 Receptor kinase-like Gene Family AT3G21630 50.812 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g2136 PK_Tyr_Ser-Thr 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2136 - K13429 gmx:100803042 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2136 4 22192500 22196637 Tpr4g2136 4 22192500 22196637 ECH