Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2135 ATGAAACTCAAAAATGTGTTAGTCTTACTATTGTTCTTTATGTTTTTGGATTGTGTTTTACTGAAAGTAGAATCCAAGTGTCTGAAAGGGTGTGATATAGCTTTAGCTTCTTACTATGTCATGCCTGCATTTAAATTCCAAATTATAACAGGCTTCATGCAATCAAAGATTGTTACCAATAATTCTTCTGATATTTTAAATAGATACAATAAAATCTTAGTAACCAATCATGCTAATATTTTTTCATTTTTTAGAATCAATATTCCATTCCCATGTGAATGTATTGAAGGTGAATTTTTAGGCCATGTGTTTGAATACACAGCAAAGGAAGGAGATACTTATGATTTGATTGCAAATACTTATTATGCAAGTTTGACAAGTGTTGAGGTTTTGAAAAAGTTTAACAGTTATGATCTAAATCATATACCTGTTAAAGCTAAGGTTAATGTTACTGTCAATTGTTCTTGTGGGAATAGTCAGATTTCAAAAGATTATGGCTTGTTTATTACCTATCCACTAAGGGCTAGTGATACTCTTCAAAAGATTGCAAGTGATTCTAAACTTGATGAAGGGGTGATACAGAGTTTCAATTCTGGTGTCAATTTCAGCAAAGGTAGTGGGATTGTGTTCATTCCAGGAAGAGATCAAAATGGAGATTATGTTCCCTTGTATCCTAGAACAGGTCTTGCTAAAGGTGCAGCTGTTGGTATAACAATAGCAGGAATACTTGGACTTTTATTAGTATTAGTTATCTGTATATATGTCAGATACTTCCGAAAGAAGGAAGAAGAGAAAACTAAATTTCCTGAAACTTCTATCGCCTGTTCATCTCAAGATGACAAATCACCCGAGTTTTCGTACAAAGAACTAGCCAATGCTACTGATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGCGAGGTCTACTATGGAGAGCTGAGAGGCAAGAAAACTGCAATAAAAAAGATGAAAATTCAAGCAACAAGAGAATTTCTTGCTGAACTCAAAGTCTTAACAAGTGTCCATCACTGGAACCTGGTACACTTGATTGGATATTGTGTTGAGGGATCTCTATTCCTTGTTTATGAATACATAGACAATGGAAACTTAAGCCAACATCTACATAATTCAGCGAAAGAACCGATGACATGGTCTACAAGGGTGCAAATTGCTCTTGATGTTGCGAGAGGACTCGAGTATATTCATGATCATTCGGTGCCTGTATACATCCATCGCGACATTAAATCAGATAACATTTTGTTAAATGAAAACTTCACTGCGAAGGTTGCAGATTTTGGATTAACCAAGCTGACTGATGTTGCAAGTTCAACCGATAAAACCGATCACATTGCAGGCACATTTGGTTACATGCCACCTGAAAATGTATATGGACGTATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAACAGCTGTGATCAAGGTTGATACAACTGAGTTTGAGTTTAAGACCAATGAATCTATTGATGAATACAAGAGCCTTGTAGCATTGTTTGATGAAGTTATTGATCAAGAGGGAGATCATATAGAAGGTCTAAGAAAACTGGTGGATCCAAGGCTAGGAGAAAACTATTCAATTGATTCCATCAACAAGATGGCACGGCTTGCCAAGGCTTGCATAAACCGAGATCCGAAACGACGTCCAACAATGAGATCTGTTGTGGTTTCTCTTATGACACTAAATTCAACAATTTATGATTATGATGGTAGTAGGGCAGACAGTGCATCATTGAGTCTTACTATGGAGCATGACTCAAATTCAAAAGAATTTCCAATGTGA 1839 0.3578 MKLKNVLVLLLFFMFLDCVLLKVESKCLKGCDIALASYYVMPAFKFQIITGFMQSKIVTNNSSDILNRYNKILVTNHANIFSFFRINIPFPCECIEGEFLGHVFEYTAKEGDTYDLIANTYYASLTSVEVLKKFNSYDLNHIPVKAKVNVTVNCSCGNSQISKDYGLFITYPLRASDTLQKIASDSKLDEGVIQSFNSGVNFSKGSGIVFIPGRDQNGDYVPLYPRTGLAKGAAVGITIAGILGLLLVLVICIYVRYFRKKEEEKTKFPETSIACSSQDDKSPEFSYKELANATDNFSLANKIGQGGFGEVYYGELRGKKTAIKKMKIQATREFLAELKVLTSVHHWNLVHLIGYCVEGSLFLVYEYIDNGNLSQHLHNSAKEPMTWSTRVQIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFTAKVADFGLTKLTDVASSTDKTDHIAGTFGYMPPENVYGRISRKIDVYAFGVVLYELISAKTAVIKVDTTEFEFKTNESIDEYKSLVALFDEVIDQEGDHIEGLRKLVDPRLGENYSIDSINKMARLAKACINRDPKRRPTMRSVVVSLMTLNSTIYDYDGSRADSASLSLTMEHDSNSKEFPM* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2135 612 Pfam Protein tyrosine and serine/threonine kinase 299 501 IPR001245 GO:0004672|GO:0006468
Tpr4g2135 612 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 12 589 - -
Tpr4g2135 612 Gene3D Transferase(Phosphotransferase) domain 1 368 595 - -
Tpr4g2135 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Tpr4g2135 612 ProSiteProfiles Protein kinase domain profile. 297 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2135 612 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Tpr4g2135 612 Gene3D Phosphorylase Kinase; domain 1 270 367 - -
Tpr4g2135 612 SMART serkin_6 297 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2135 612 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 589 IPR044812 GO:0019199|GO:0045087
Tpr4g2135 612 SUPERFAMILY Protein kinase-like (PK-like) 279 577 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2135 Tpr-Chr4 22177033 22180630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2135 1 588 Receptor kinase-like Gene Family AT3G21630 50.081 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g2135 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2135 - K13429 mtr:MTR_5g086540 748.814