Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2134 ATGAAGCTCAAAAATAAGTTCATATTGTTGATTCTATTTCTGCATTGTGTTATTTTCAATGTTGAATCAAAGTGTGTGAAAGGGTGTGATGTAGCTTTAGCTTCATACTATATCATGCCTTTAGTACAACTCCCAAATATAACAACATTTATGCAATCAAAGATTGTTAAAAATTCTCCTAAAGTTATAATGAGCTATAATAAAGACATAGTATTTAGTAATGATAATGTATTTTCATATTTTAGAATCAACATTCCATTCCCATGTGAATGTATTGGAGGCGAATTTCTCGGTCATGTGTTTGAGTATTCTTCTTCTGAAGGAGATACTTACGATTTGATTGCGAATACTTATTATGCAAGTTTGACAACTGTTGAGGTTTTGAAAAAGTTCAATAGTTATGATCCAAATCATATACCTGTTAAGGCTAAGGTTAATGTTACTGTAAATTGTTCTTGTGGGAATAGTCAGATTTCAAAAGATTATGGCTTGTTTATTACTTATCCGCTAAGGGCTAGGGATAATCTTCAAAAGATTGCAAGTGATTCTGAACTTGATGAAGGGGTGATACAGAGTTTCAATTCTGGTGTCAATTTTAGCAAAGGTAGTGGGATTGTGTTCATTCCAGGAAGAGATCAAAATGGAGATTATGTTCCCTTGTATCCTAGAACAGGTCTTGCTAAAGGTGCAGCTGTTGGTATAACAATAGCAGGAATACTTGGACTTTTATTAGTATTAGTTATCTGTATATATGTCAGATACTTCCGAAAGAAGGAAGAAGAGAAAACTAAATTTCCTGAAACTTCTATCGCCTGTTCATCTCAAGATGACAAATCACCCGAGTTTTCGTACAAAGAACTAGCCAATGCTACTGATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGCGAGGTCTACTATGGAGAGCTGAGAGGCAAGAAAACTGCAATAAAAAAGATGAAAATTCAAGCAACAAGAGAATTTCTTGCTGAACTCAAAGTCTTAACAAGTGTCCATCACTGGAACCTGGTACACTTGATTGGATATTGTGTTGAGGGATCTCTATTCCTTGTTTATGAATACATAGACAATGGAAACTTAAGCCAACATCTACATAATTCAGCGAAAGAACCGATGACATGGTCTACAAGGGTGCAAATTGCTCTTGATGTTGCGAGAGGACTCGAGTATATTCATGATCATTCGGTGCCTGTATACATCCATCGCGACATTAAATCAGATAACATTTTGTTAAATGAAAACTTCACTGCGAAGGTTGCAGATTTTGGATTAACCAAGCTGACTGATGTTGCAAGTTCAACCGATAAAACCGATCACATTGCAGGCACATTTGGTTACATGCCACCTGAAAATGTATATGGACGTATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAACAGCTGTGATCAAGATTGATACAACTGAGTTTGAGTTTAAGACCAATGAATCTATTGATGAATACAAGAGCCTTGTAGCATTGTTTGATGAAGTTATTGATCAAGAGGGAGATCATATAGAAGGTCTAAGAAAACTGGTGGATCCAAGGCTAGGAGAAAACTATTCAATTGATTCCATCAACAAGATGGCACGGCTTGCCAAGGCTTGCATAAACCGAGATCCGAAACGACGTCCAACAATGAGATCTGTTGTGGTTTCTCTTATGACACTAAATTCAACAATTTATGATTATGATGGTAGTAGGGCAGACAGTGCATCATTGAGTCTTACTATGGAGCATGACTCAAATTCAAAAGAATTTCCAATGTGA 1830 0.3596 MKLKNKFILLILFLHCVIFNVESKCVKGCDVALASYYIMPLVQLPNITTFMQSKIVKNSPKVIMSYNKDIVFSNDNVFSYFRINIPFPCECIGGEFLGHVFEYSSSEGDTYDLIANTYYASLTTVEVLKKFNSYDPNHIPVKAKVNVTVNCSCGNSQISKDYGLFITYPLRARDNLQKIASDSELDEGVIQSFNSGVNFSKGSGIVFIPGRDQNGDYVPLYPRTGLAKGAAVGITIAGILGLLLVLVICIYVRYFRKKEEEKTKFPETSIACSSQDDKSPEFSYKELANATDNFSLANKIGQGGFGEVYYGELRGKKTAIKKMKIQATREFLAELKVLTSVHHWNLVHLIGYCVEGSLFLVYEYIDNGNLSQHLHNSAKEPMTWSTRVQIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFTAKVADFGLTKLTDVASSTDKTDHIAGTFGYMPPENVYGRISRKIDVYAFGVVLYELISAKTAVIKIDTTEFEFKTNESIDEYKSLVALFDEVIDQEGDHIEGLRKLVDPRLGENYSIDSINKMARLAKACINRDPKRRPTMRSVVVSLMTLNSTIYDYDGSRADSASLSLTMEHDSNSKEFPM* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2134 609 SMART serkin_6 294 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2134 609 Pfam Protein tyrosine and serine/threonine kinase 296 498 IPR001245 GO:0004672|GO:0006468
Tpr4g2134 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Tpr4g2134 609 Gene3D Transferase(Phosphotransferase) domain 1 365 592 - -
Tpr4g2134 609 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 10 586 - -
Tpr4g2134 609 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Tpr4g2134 609 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 586 IPR044812 GO:0019199|GO:0045087
Tpr4g2134 609 Gene3D Phosphorylase Kinase; domain 1 267 364 - -
Tpr4g2134 609 ProSiteProfiles Protein kinase domain profile. 294 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2134 609 SUPERFAMILY Protein kinase-like (PK-like) 276 574 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2134 Tpr-Chr4 22168837 22172535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2134 1 585 Receptor kinase-like Gene Family AT3G21630 50.891 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g2134 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2134 - K13429 mtr:MTR_5g086540 761.525