Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2133 ATGAAGCTCAAAAATAAGTTCATATTGTTGATTCTATTTCTGCATTGTGTTATTTTCAATGTTGAATCAAAGTGTGTGAAAGGGTGTGATGTAGCTTTAGCTTCATACTATATCATGCCTTTAGTACAACTCTCAAATATAACAACATTTATGCAATCAAAGATTGTTAAAAATTCTCCTAAAGTTATAATGAGCTATAATAAAGACATAGTATTTAGTAATGATAATCTATTTTCATATTTTAGAATCAACATTCCATTCCCATGTGAATGTATTGGAGGCGAATTTCTCGGTCATGTGTTTGAGTATTCTTCTTCTGAAGGAGATACTTACGATTTGATTGCGAATACTTATTATGCAAGTTTGACAACTGTTGAGGTTTTGAAAAAGTTCAATAGTTATGATCCAAATCATATACCTGTTAAGGCTAAGGTTAATGTTACTGTAAATTGTTCTTGTGGGAATAGTCAGATTTCAAAAGATTATGGCTTGTTTATTACTTATCCACTAAGGGCTAGGGATAATCTTCAAAAGATTGCAAGTGATTCTGAACTTGATGAAGGGTTGATACAGAGTTTCAATTCTGGTGTCAATTTTAGCAAAGGGAGTGGGATTGTGTTCATTCCAGGAAGAGATCAAAATGGAGATTATGTTCCCTTGTATCCTAGAACAGGTCTTGCTAAAGGTGCAGCTATTGGTATAACTATAGCAGGAATATTTGGACTTCTATTAATAGTTATTTGTATATATGTCAAATACTTCCAAAAGAAGGAAGAAGAGAAAGTTAAACTTCCACAAACTTCTATTGCACTTTCAACTCAAGATGCCTCTGGTAGTGGAGAATATGAAACATCAGGATCCAGTGTGCCTGGTACTGGTAGTACTGCTGGTCTTACGGGCATTATGGTCGCAAAGTCAACAGAATTTTCGTATCAAGAACTAGCTAAAGCTACAAATAACTTCAGCTTGGAGCATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTTAGAGGCGAGAAAACAGCGATTAAGAAGATGGACGTACAAGCGTCGACAGAATTTCTTTGTGAGTTGAAAGTCTTAACACATGTTCATCACTTGAATCTGGTGAGGTTGATTGGATATTGCGTCGAGGGGTCACTTTTCCTTGTATATGAACATATTGACAATGGAAACTTGGGTGAATACTTGCATGGTATAGGCAGAGAACCATTACCATGGTCTAGCAGAGTGCAAATTGCTCTTGATTCAGCAAGAGGTCTTGAATACATTCATGAACACACTGTACCTGTGTATATCCATCGCGATGTAAAATCCGCAAATATATTGATAGACAAAAACTTACGCGGAAAGGTCGCGGATTTTGGCTTGACCAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTCGTTGGAACTTTTGGTTACATGCCACCTGAATATGCTCAATATGGTGATGTATCTCCAAAAATAGATGTGTATGCTTTCGGAGTTGTTCTTTATGAACTTATATCTGCAAAGAATGCTATTCTAAAGACAGGTGAATCTGTTGCTGAATCAAAGGGTCTTGTAGTCTTGTTCGAAGAAGCACTTAATCAGATTGATCCTTTAGAAGGTATTCGCAAATTGGTCGATCCTAGGCTGAAAGAGAACTATCCAATTGATTCTGTTCTAAAGATGGTTGAACTTGCAAGAGGATGTACAAGAGACAATCCACTACTACGTCCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTTTCATCACCAACTGAAGATTGTTATTATGACACTTCCTATGAAAATCAATCTCTCATAAATATACTCTCACTCAGATGA 1860 0.3624 MKLKNKFILLILFLHCVIFNVESKCVKGCDVALASYYIMPLVQLSNITTFMQSKIVKNSPKVIMSYNKDIVFSNDNLFSYFRINIPFPCECIGGEFLGHVFEYSSSEGDTYDLIANTYYASLTTVEVLKKFNSYDPNHIPVKAKVNVTVNCSCGNSQISKDYGLFITYPLRARDNLQKIASDSELDEGLIQSFNSGVNFSKGSGIVFIPGRDQNGDYVPLYPRTGLAKGAAIGITIAGIFGLLLIVICIYVKYFQKKEEEKVKLPQTSIALSTQDASGSGEYETSGSSVPGTGSTAGLTGIMVAKSTEFSYQELAKATNNFSLEHKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGEYLHGIGREPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAILKTGESVAESKGLVVLFEEALNQIDPLEGIRKLVDPRLKENYPIDSVLKMVELARGCTRDNPLLRPSMRSIVVALMTLSSPTEDCYYDTSYENQSLINILSLR* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2133 619 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Tpr4g2133 619 ProSiteProfiles Protein kinase domain profile. 321 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2133 619 Gene3D Phosphorylase Kinase; domain 1 301 391 - -
Tpr4g2133 619 SMART serkin_6 321 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2133 619 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 605 IPR044812 GO:0019199|GO:0045087
Tpr4g2133 619 Pfam Protein tyrosine and serine/threonine kinase 322 590 IPR001245 GO:0004672|GO:0006468
Tpr4g2133 619 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 10 605 - -
Tpr4g2133 619 SUPERFAMILY Protein kinase-like (PK-like) 302 591 IPR011009 -
Tpr4g2133 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Tpr4g2133 619 Gene3D Transferase(Phosphotransferase) domain 1 392 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2133 Tpr-Chr4 22157148 22161872 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2133 1 619 Receptor kinase-like Gene Family AT3G21630 54.952 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g2133 PK_Tyr_Ser-Thr 4.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2133 - K13429 gmx:100776847 937.947