Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2132 ATGAAACTAAAAAATGTGTTACTATTGGTCTTTCTATTTGTTGAATGTGTTTTTTTCAAAGTTGAATCAAAGTGTGTGAAAGGGTGTGATATAGCTTTAGCTTCTTACTATGTCTTACCTTTAGTTGAACTTCCAAGTGTAAAAAACTTTATGCAATCAAAGATTGTTACAAATTCTTCTGATATTTTAAATAAATACAATAAAGTCTTAGTAACCAATCATGGTAATATTTTTTCATTTTTTAGAATCAATATTCCATTCCCATGTGAATGTATTGGAGGTGAATTTCTTGGTCATGTGTTTGAATACACAGCGAAAGAAGGCGATACTTATGATTTGATTGCAAATACTTATTATGTAAGTTTAACAACTGTTGAGCTTTTGAAAAAGTTCAATAGTTATGATCCAAATCATATACCTGCTAAGGGTAAGGTTAATGTCACTGTCAATTGTTCTTGTGGGAATAGCCAAGTTTCAAAAGATTATGGCTTGTTTATTACATATCCACTTAGAACTGGTGATACTCTTAAGAAGATTGCAAATGAGTCTAAACTTGATGAAGGGTTGTTACAGAATTACAATCCTGGTGTCGATTTCAGCAAAGAGAGTGGGATTGTGTTCATTCCAGGAAGAGATCAAAATGGAGATTATGTTCCCTTATATCCTAGAACAGGTCTTGCTAAGGGCGCAGCGGTTGGTATATCTATAGCAGGAATATTCGGGTTTGTATTATTTGTTATCTGTATATATGTTAGATACATTAAGAAGAAGGAAGAAGAGAAAGATAAACTTCCTCGAACTTCTATGAAGCTTTCAACTCAAGATGGTAGTGGAGAATATGAAACTTCCAGTGGCACTGGTAGTGCTACTGGCCTTACAGGTATTATGGTGGCAAAGTCAACAGAGTTTTCATATCAAGAACTAGCCAAAGCTACAAATAACTTCAACTTGGATCATAAAATTGGTCAAGGTGGATTTGGAGCTGTTTATTATGCAGAACTTAGAGGCGAGAAAACAGCAATTAAGAAGATGGACGTACAAGCGTCGACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCATCACTTGAATCTGGTACGTTTGATTGGATATTGCGTTGAGGGATCACTTTTCCTTGTATACGAACATATTGACAATGGAAACTTGGGTCATTATTTGCACGGAATAGGTAAAGAACCATTACCATGGTCAAGTAGAGTTCAGATTGCTCTAGATTCAGCAAGAGGCCTTGAATACATTCATGAGCACACTGTGCCTGTGTATATCCATCGAGATGTAAAATCAGCAAATATATTGATAGACAAAAACTTGCGCGGAAAGGTTGCAGATTTTGGCTTAACCAAACTTATTGAAGTTGGAAGCTCTACACTTCACACTCGTCTTGTTGGAACTTTCGGATACATGCCACCAGAGTATGCTCAATATGGCGATATTTCTCCGAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCTGCAAAGAATGCTGTTCTAAGGACAGGTGAAACTGTTGCTGAATCAAAGGGTCTTGTAGCCTTGTTTGGAGAAGCACTTAATCAAATTGATCCTTTAGAAGGTCTTCGCAAACTTGTGGATCCTAGGCTTAAAGAAAACTATCTAATTGAAGATGTTCTCAAGATGGCTGAACTTGGGAGAGCATGTACACGAGACAATCCGTTACTACGCCCAAGTATGAGATCTGCAGTTGTGGCTCTTATGAGACTTTCACCACCAACCCAAGATTGTGATGATGATGATGATGATGATACTTCCTATGAAAATCAAACTATCATAAATCTATTGTCAGTGAGATGA 1854 0.3619 MKLKNVLLLVFLFVECVFFKVESKCVKGCDIALASYYVLPLVELPSVKNFMQSKIVTNSSDILNKYNKVLVTNHGNIFSFFRINIPFPCECIGGEFLGHVFEYTAKEGDTYDLIANTYYVSLTTVELLKKFNSYDPNHIPAKGKVNVTVNCSCGNSQVSKDYGLFITYPLRTGDTLKKIANESKLDEGLLQNYNPGVDFSKESGIVFIPGRDQNGDYVPLYPRTGLAKGAAVGISIAGIFGFVLFVICIYVRYIKKKEEEKDKLPRTSMKLSTQDGSGEYETSSGTGSATGLTGIMVAKSTEFSYQELAKATNNFNLDHKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGHYLHGIGKEPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGSSTLHTRLVGTFGYMPPEYAQYGDISPKIDVYAFGVVLFELISAKNAVLRTGETVAESKGLVALFGEALNQIDPLEGLRKLVDPRLKENYLIEDVLKMAELGRACTRDNPLLRPSMRSAVVALMRLSPPTQDCDDDDDDDTSYENQTIINLLSVR* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2132 617 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Tpr4g2132 617 SMART serkin_6 315 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2132 617 Pfam LysM domain 103 140 IPR018392 -
Tpr4g2132 617 Pfam LysM domain 171 198 IPR018392 -
Tpr4g2132 617 SUPERFAMILY Protein kinase-like (PK-like) 296 585 IPR011009 -
Tpr4g2132 617 Gene3D Phosphorylase Kinase; domain 1 295 385 - -
Tpr4g2132 617 MobiDBLite consensus disorder prediction 269 286 - -
Tpr4g2132 617 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 599 IPR044812 GO:0019199|GO:0045087
Tpr4g2132 617 Pfam Protein tyrosine and serine/threonine kinase 316 506 IPR001245 GO:0004672|GO:0006468
Tpr4g2132 617 ProSiteProfiles LysM domain profile. 101 147 IPR018392 -
Tpr4g2132 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Tpr4g2132 617 MobiDBLite consensus disorder prediction 264 286 - -
Tpr4g2132 617 CDD LysM 103 132 IPR018392 -
Tpr4g2132 617 Gene3D Transferase(Phosphotransferase) domain 1 386 612 - -
Tpr4g2132 617 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 10 599 - -
Tpr4g2132 617 ProSiteProfiles Protein kinase domain profile. 315 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2132 Tpr-Chr4 22150258 22154036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2132 1 617 Receptor kinase-like Gene Family AT3G21630 52.472 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g2132 PK_Tyr_Ser-Thr 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2132 - K13429 gmx:100776847 916.761