Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2126 ATGAAACCAATCAAATTGAGATTATCACTTTTATTCTTGTTACTGGCCTCTAAATCCTTCATTGCAGAATCAAAATGCAACAAAACTTGTGACTTAGCTTTAGCTTCCTATCATCCGATGAAAGATTCAAACTTGACATATATTTCGGAAATCATGAAATCCAACCTTGTTTCAAAACCGGAAGATATTTTCATCTACAGCACAGATACAATGCCAAACCAAAATTTTGTCCGAGCCAGTTCAAGAGTGAATGTTCCCTTCCCTTGTGATTGCATCAATGATGAGTTTCTTGGTCACACTTTTCTATATGAGCTTCAGCCAACAGATACCTATGCTTCAATTGCTGAGTTCACTTTTAGAAATTTGACCACTAAGGAGAGGATCCAAAGAGACAACGTTTATGCAGAAAACTTTATTCCTAAGTTTGTGAAGGTTAATGTTACTGTTAACTGTTCCTGTGGGAACAGAGAGGTTTCCAATGATTATGGATTGTTCATCACATACCCTCTTACTTCTAAGGACACTTTGGAGTCTATTGCAAAGGATACCAAGCTTGATGCTGAGTTGCTGCAGAGGTACAACCCTGGTGTGGATTTCAGCCAAGGAAGTGGTCTTGTTTTTATTCCAGGGAAAGATGAAAATGGAATTTATGTTCCCTTGTGCCCGACCCCTAGAAAAGCAGGTCATTTAGCTAGGAGTTTAGCTACTGCTGGAATATCTATTGGAGGAATATGCATGGTTCTGTTATTATCAATTTGTATATATGTTCGATACTTTCGAAAGAAGAATGGAGACGAGTCTAATTTGCCACCAAATGGTTATAAAGATGCCAATGATGATACTGGATCCAAATATATTTTTGAGGACAAATTGCCAAAGTTTTCGTATGTAGAACTCGCCAATGCTACAAATAACTTCAGTCTGGCTAACAAAATTGGTGAAGGTGGTTTTGGTGAAGTCTACTATGGAGAGCTGAGAGGGCAGAAAACTGCAATAAAAAAGATGAAGATGCAAGCAACAACAGAATTTCTTGCTGAACTGCAAATCTTAACAAAAGTTCGTCACTGGAACCTGGTACACTTGATTGGATATTGTGTTGAGGAATCTCTATTCCTTGTGTATGAGTACATGGAAAATGGAAACTTAAGCCAACATATACATAATTCAGGGAGAGAAGCGATGGCGTGGGCTACCAGAATGCAAATTGCTCTTGATGTAGCAAGAGGCCTTGAATACATTCATGAGCATTCAGTGCCTGTGTATATCCATCGCGATATAAAACCAGATAATATTTTATTAAATGAAAATTTCACTGCAAAGATTGCAGATTTCGGAGTAACCAGGCTTACGGATATTGCAAATTCAGCAGATCAAACTCATCATATGGCAGGCACATTTGGTTACATGCCACCTGAAAATGCATACGGACATATTTCTCGCAAGATAGATGTATATGCTTTCGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAGCAGCTGTGATCAAGATCGATAAAACCGAGTTCAAGAGCCTGGAGATTACGACCAATGAATCTATCGATGAATATTACACGAGTCTTGTAGCTTTGTTTGATGAAGCTATTGATCAAGAGAGAGATCCTATAGAAAGTCTAAGAAAGTTGGTGGATCCAAGGCTTGGAGATAATTATTCAATTGATTCCATTATCAAGATGGCACAGCTTGCCAAGGCTTGCATAAATCAAGATCCGAAACGACGTCCGACAATGAGAGCTGTTGTGGTTTTTCTTATGACACTAAATTCTACAATTGATGATGGAAGTAGCACTGATAATGCAGCATTGACTCTGGCTATGGAGCATGACTAA 1848 0.3831 MKPIKLRLSLLFLLLASKSFIAESKCNKTCDLALASYHPMKDSNLTYISEIMKSNLVSKPEDIFIYSTDTMPNQNFVRASSRVNVPFPCDCINDEFLGHTFLYELQPTDTYASIAEFTFRNLTTKERIQRDNVYAENFIPKFVKVNVTVNCSCGNREVSNDYGLFITYPLTSKDTLESIAKDTKLDAELLQRYNPGVDFSQGSGLVFIPGKDENGIYVPLCPTPRKAGHLARSLATAGISIGGICMVLLLSICIYVRYFRKKNGDESNLPPNGYKDANDDTGSKYIFEDKLPKFSYVELANATNNFSLANKIGEGGFGEVYYGELRGQKTAIKKMKMQATTEFLAELQILTKVRHWNLVHLIGYCVEESLFLVYEYMENGNLSQHIHNSGREAMAWATRMQIALDVARGLEYIHEHSVPVYIHRDIKPDNILLNENFTAKIADFGVTRLTDIANSADQTHHMAGTFGYMPPENAYGHISRKIDVYAFGVVLYELISAKAAVIKIDKTEFKSLEITTNESIDEYYTSLVALFDEAIDQERDPIESLRKLVDPRLGDNYSIDSIIKMAQLAKACINQDPKRRPTMRAVVVFLMTLNSTIDDGSSTDNAALTLAMEHD* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2126 615 Pfam Protein kinase domain 308 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2126 615 Gene3D Transferase(Phosphotransferase) domain 1 377 609 - -
Tpr4g2126 615 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 11 605 - -
Tpr4g2126 615 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Tpr4g2126 615 ProSiteProfiles Protein kinase domain profile. 306 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2126 615 SUPERFAMILY Protein kinase-like (PK-like) 283 590 IPR011009 -
Tpr4g2126 615 SMART serkin_6 306 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2126 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Tpr4g2126 615 Gene3D Phosphorylase Kinase; domain 1 277 376 - -
Tpr4g2126 615 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 605 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2126 Tpr-Chr4 22101184 22107165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2126 4 596 Receptor kinase-like Gene Family AT3G21630 47.967 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g2126 Pkinase 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2126 - K13429 mtr:MTR_5g086540 849.736