Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2122 ATGAAAAATGGAAGCCTTCATGATATTTTGCATGAAAAGAAACCACCACCACCGTTAACATGGAATGTTCGGTGTAAAATAGCTGTTGGAATTGCTCAAGGACTACTATATCTGCATTATGATTGTGTTCCACGAATAGTGCACCGAGACATAAAACCAAAGAACATACTTGTTGACGACAATATGGAGCCTATCATAGCTGATTTTGGCACTGCCCTATGCAAGAAGGTGTTTGAGGATTCTAATAGTCATTCAACAATCCGGAAAATGCTTTCGTCACACGTTGTTGGTACTCCTGGCTATATTGCACCGGAGAATGCATATGATATTGTGCCGGGAAGAAAGTCGGATGTATATAGCTATGGAGTTGTTTTGCTCGAGCTATTAACCAGAAAGAAACTGTTAGTCCCGTCTTTGAATGATGAGGCAGAGGATACCCCCTTAGTGATCTGGGCTAGATCTGTATGGATGGAAACAGGCAAAATTGAGAAGATTGTTGATCCATACCTTGCAAGTGAATTTTCCAGTTCAGTAGCAATAGCCAAGCAAGTTGCTGCAGTCCTTTCATTGGCATTCCGATGCATAGAGAAGGATCCAGGAAAGAGGCCGAACATGAAAGGTGTTATTAGCATTTATAATAAGAACTTGTTTAAGCTGAGGCGTGATGAGGTTCAATATGTCGATGTGCTTGCAATTAAACTGATGGGAAATGGTAAGTTGCAGGCAGACAAGTTTGTTCGGATAGCTTCTCTAATTGTTCCAAAAATAACCTATTCTTCGCGTAGTTTAATCTTCCTTTCCTCTATCACTGGTCCAATACTCACCAAACCTTTCAACTGGTTTTTCCTTTTACGTTGGGGTCAATATAGGCATCTGCAGAAATCCTTAGGAGCACATGGTGTTGTGTACAAAGCCGTGATTGATCAACTGGTTTGTTCTGTAAAGAAGGTTGAATTTGAATGGAACAAGAAAAAGCGTATGAATATCATGCGCAACGAAATTGAAGTCTTAGAGAAGTTTAAGCATCGAAATTTGATCAAATGCTATGGCTGCTGGATTGGAGATGACTATGGTCTAATCTTATCTAGATTCATGGAAAATGGATGCCTTCATGATACCTTGCATGAGAAGAAACCCCCACCACCGTTAACTTGGAATGTTGGGGACAATAACTTTAATAAGACAAAATTATTGATTTAA 1200 0.3975 MKNGSLHDILHEKKPPPPLTWNVRCKIAVGIAQGLLYLHYDCVPRIVHRDIKPKNILVDDNMEPIIADFGTALCKKVFEDSNSHSTIRKMLSSHVVGTPGYIAPENAYDIVPGRKSDVYSYGVVLLELLTRKKLLVPSLNDEAEDTPLVIWARSVWMETGKIEKIVDPYLASEFSSSVAIAKQVAAVLSLAFRCIEKDPGKRPNMKGVISIYNKNLFKLRRDEVQYVDVLAIKLMGNGKLQADKFVRIASLIVPKITYSSRSLIFLSSITGPILTKPFNWFFLLRWGQYRHLQKSLGAHGVVYKAVIDQLVCSVKKVEFEWNKKKRMNIMRNEIEVLEKFKHRNLIKCYGCWIGDDYGLILSRFMENGCLHDTLHEKKPPPPLTWNVGDNNFNKTKLLI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2122 399 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2122 399 Gene3D Transferase(Phosphotransferase) domain 1 1 229 - -
Tpr4g2122 399 SUPERFAMILY Protein kinase-like (PK-like) 1 210 IPR011009 -
Tpr4g2122 399 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 297 387 - -
Tpr4g2122 399 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 221 - -
Tpr4g2122 399 SUPERFAMILY Protein kinase-like (PK-like) 296 385 IPR011009 -
Tpr4g2122 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Tpr4g2122 399 Pfam Protein kinase domain 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2122 399 Pfam Protein tyrosine and serine/threonine kinase 297 379 IPR001245 GO:0004672|GO:0006468
Tpr4g2122 399 PANTHER OS08G0446200 PROTEIN 297 387 - -
Tpr4g2122 399 PANTHER OS08G0446200 PROTEIN 1 221 - -
Tpr4g2122 399 Gene3D Transferase(Phosphotransferase) domain 1 279 392 - -
Tpr4g2122 399 ProSiteProfiles Protein kinase domain profile. 288 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2122 399 SMART serkin_6 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2122 Tpr-Chr4 22010197 22012343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2122 297 379 Receptor kinase-like Gene Family AT1G73080 42.857 3.28e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g2122 Pkinase 1.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2122 - - mtr:MTR_5g087340 497.278