Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2105 ATGACCAAAACTAGTTGTAGCAGTAGAATTATCAAACTCTTGTTGTTCATTATATCTTTCTTGCATGTTGGTTTTGCTCTTTCCTCTGATGGATTGACTCTGTTGTCACTCTTGACACACTGGACTTCTGTTCCTACCCTCATCAGCTCAAGCTGGAAGGCTTCTGATTCCAATCCATGCTCATGGGTTGGTGTTCAATGTGACCATACCAATAATTTGATTTCCCTTAACCTTACTAGTCATGGAATTTTTGGTCAACTTGGATCAGAAATTGGGAACCTTTACAATTTGCAGACCCTTGTATTGTCAGGTAATGGTTTCTCAGGAAAAGTCCCTTTAGAGTTAAGTAACTGTAGTTTGATTCAGTATTTAGACCTTGAAGGTAATAGATTTAGTGGAAATATACAATATAGTTTTATAAACTTGCAAAATTTACAGTTCATGAGATTGTCTTCCAATATGCTCACTGGCGAAATTCCGGATTCTTTGTTTGAAATTCCTTCCCTTAAAGAACTGAGCCTGCATAGTAATCTTCTTAGTGGCCCTATTCCAACAAGTATCGGAAACTTGACTCAACTATTGAGGTTGTATCTATATGGCAATCAGTTGTCAGGGACTATTCCTTCATCCATTGGTAATTGCAGTAAATTAGAGGACCTAGAATTGTCTTTCAACCGATTGAGAGGTGAAATTCCGAACAGCATTTGGAGAATTCCAAGTCTTGTGAACATATTGGTTCACAACAACAGCCTCTCTGGGGAGCTACCTACCGAGATGACAAACCTCAAGTATCTAAAAAATATCTCATTGTTTGATAATCAGTTCTCAGGAGTCATACCTCAAAGTTTAGGAATCAACAGCAGCATAGTGAAGTTGGACTGTATGAATAACAAGTTCACTGGTAATATCCCGCCAAGTCTTTGCTTTGGAAAGAATTTGTTAGAGCTCAACATGGGAATCAATCAACTTCAAGATGGCATACCTTCGGATGTAGGAAGATGTGCAACTCTAAGGAGGTTGATTCTCAACGAGAATAATTTCAGCGGCCCTCTTCCTAATTTTGAAAGTAATATGAATCTGAAATACATTGATCTGACCAAGAACAATATCAGTGGAACGATTCCATCAAGTTTGGGAAATAGCACAAATCTCACATACATTAATTTTTCAAGGAACAAATTTGCAGGGCTCATACCACCAGAACTTGGAAACCTTGTCAATCTTGTGGTTTTGGATCTTTCTCACAACAACTTGGAAGGTCCTTTGCCAATTCAACTGTCAAATTGTACTAAAATAGATCGTTTTGATGTGGGATTCAATTTCCTAAATGGCTCATTCCCTTCAAGTCTGAGAAGTTGGACAAACATAACTACATTGATTTTAAGAGAAAATCACTTCACAGGAGGTATACCAGGATTTTTGGCAGAATTTAACAACCTTCGTGAGTTACAACTTGGTGGAAATTTTTTTGGCGGCAAAATTCCTCAATTGATGGGAACAATGCATAATCTGTTCTATGGATTAAATCTTAGTGCTAATGGATTGATAGGTGACATTCCTTCAGAAATTGGGAAGCTTGAACTGCTTCAAAGTCTGGATATATCCTTGAACAATTTGACAGGAAGTATAGATGCTCTTGAAGGTCTTGTTTCATTAATTGAAATCAATATTTCTTACAATCTCTTCAATGGTTCTGTACCAACAGGTCTAACGAAGTTATTGAATTCCTCACCATCTTCATTCATCGGTAACCCTCTCCTTTGTTTCAGTTGTTTGAGTTGCATTGAAACTAGTTTTGTTAATCCATGTGTCTACAAATCAAGTAATCACAAAAGCATCAGTACTGTTCAAATTGTGATGATAGAACTTGGATCCTCGATATTTATTACTGTTGTGATCCTAATAATAATTCGAATTTATTTCCTCAAGATGTCATGTTCCCCACTGGTGATGGTGTTGAAGGCTATGGCTAAATTATACGATTGCTATAATTTTGGCAGAGGAATTGTGCATAAAAGCCAGCAGGGCCGAGAATCGGAAATGGCGTCTGATCTTAAGCAACAGTCTGATATTGAAAGAGGAGCTACACTTCGCCAACAGTCTTACAATGAAAGAGGAGCTGCTCCGGCGTCCGAGTTTAGCAAATGGTCCTATTATATTGAAAAAGGAGTTGGAAGGATTGGAGTCACATATGCTCGAGAATTCAATATCTCAGGCAAAGAGAAGTTGCGTACCCTTAAGGATGTAGTGTTGGAGGCTACTGAAAATCTAAATCAACGGTATATTATTGGCAAGGGAGGACATGGTACTGTGTACAAAGCCATAATTGGTCAACAGATTTTTGCTGTAAAGAAGGTTGAATTTGGACGGAACAAGAAAAAGCGGCTAAGTATCATACGTAATGAAATTGAAGTCCTTGGGATGTTTAAGCATCGAAATTTGTTGAAACATGCAGACTACTGGATTGGTGAGGAATATGGTTTAGTCTTATGTGAATTCATGAAAAATGGAAGCCTTCATGATATTTTGCATGAAAAGAAACCACCACCACCGTTAACATGGAATGTTCGGTGTAAAATAGCTGTTGGAATTGCTCAAGGACTACTATATCTGCATTATGATTGTGTTCCACGAATAGTGCACCGAGACATAAAACCAAAGAACATACTTGTTGACGACAATATGGAGCCTATCATAGCTGATTTTGGCACTGCCCTATGCAAGAAGGTGTTTGAGGATTCTAATAGTCATTCAACAATCCGGAAAATGCTTTCGTCACACGTTGTTGGTACTCCTGGCTATATTGCACCGGAGAATGCATATGATATTGTGCCGGGAAGAAAGTCGGATGTATATAGCTATGGAGTTGTTTTGCTCGAGCTATTAACCAGAAAGAAACTGTTAGTCCCGTCTTTGAATGATGAGGCAGAGGATACCCCCTTAGTGATCTGGGCTAGATCTGTATGGATGGAAACAGGCAAAATTGAGAAGATTGTTGATCCATACCTTGCAAGTGAATTTTCCAGTTCAGTAGCAATAGCCAAGCAAGTTGCTGCAGTCCTTTCATTGGCATTCCGATGCATAGAGAAGGATCCAGGAAAGAGGCCGAACATGAAAGGTGTTATTAGCATTTATAATAAGAACTTGTTTAAGCTGAGGCGTGATGAGGTTCAATATGCCGATGTGCTTGCAATTAAACTGATGGGAAATGGTAAGTTGCAGGCAGACAAGTTTGTTCGGATAGCTTCTCTAATTGTTCCAAAAATAACCTATTCTTCGCGTAGTTTAATCTTCCTTTCCTCTATCACTGGTCCAATACTCACCAAACCTTTCAACTGGTTTTTCCTTTTACGTTGGGGTCAATATAGGCATCTGCAGAAATCCTTGTACTCACAGACCAAATCATACTACTCTATAACTATAAACACTGATCAAACCGAGGCCACTGTCCAAATTAGTGTATAG 3465 0.3859 MTKTSCSSRIIKLLLFIISFLHVGFALSSDGLTLLSLLTHWTSVPTLISSSWKASDSNPCSWVGVQCDHTNNLISLNLTSHGIFGQLGSEIGNLYNLQTLVLSGNGFSGKVPLELSNCSLIQYLDLEGNRFSGNIQYSFINLQNLQFMRLSSNMLTGEIPDSLFEIPSLKELSLHSNLLSGPIPTSIGNLTQLLRLYLYGNQLSGTIPSSIGNCSKLEDLELSFNRLRGEIPNSIWRIPSLVNILVHNNSLSGELPTEMTNLKYLKNISLFDNQFSGVIPQSLGINSSIVKLDCMNNKFTGNIPPSLCFGKNLLELNMGINQLQDGIPSDVGRCATLRRLILNENNFSGPLPNFESNMNLKYIDLTKNNISGTIPSSLGNSTNLTYINFSRNKFAGLIPPELGNLVNLVVLDLSHNNLEGPLPIQLSNCTKIDRFDVGFNFLNGSFPSSLRSWTNITTLILRENHFTGGIPGFLAEFNNLRELQLGGNFFGGKIPQLMGTMHNLFYGLNLSANGLIGDIPSEIGKLELLQSLDISLNNLTGSIDALEGLVSLIEINISYNLFNGSVPTGLTKLLNSSPSSFIGNPLLCFSCLSCIETSFVNPCVYKSSNHKSISTVQIVMIELGSSIFITVVILIIIRIYFLKMSCSPLVMVLKAMAKLYDCYNFGRGIVHKSQQGRESEMASDLKQQSDIERGATLRQQSYNERGAAPASEFSKWSYYIEKGVGRIGVTYAREFNISGKEKLRTLKDVVLEATENLNQRYIIGKGGHGTVYKAIIGQQIFAVKKVEFGRNKKKRLSIIRNEIEVLGMFKHRNLLKHADYWIGEEYGLVLCEFMKNGSLHDILHEKKPPPPLTWNVRCKIAVGIAQGLLYLHYDCVPRIVHRDIKPKNILVDDNMEPIIADFGTALCKKVFEDSNSHSTIRKMLSSHVVGTPGYIAPENAYDIVPGRKSDVYSYGVVLLELLTRKKLLVPSLNDEAEDTPLVIWARSVWMETGKIEKIVDPYLASEFSSSVAIAKQVAAVLSLAFRCIEKDPGKRPNMKGVISIYNKNLFKLRRDEVQYADVLAIKLMGNGKLQADKFVRIASLIVPKITYSSRSLIFLSSITGPILTKPFNWFFLLRWGQYRHLQKSLYSQTKSYYSITINTDQTEATVQISV* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2105 1154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 879 891 IPR008271 GO:0004672|GO:0006468
Tpr4g2105 1154 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Tpr4g2105 1154 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 1054 - -
Tpr4g2105 1154 Gene3D Phosphorylase Kinase; domain 1 738 833 - -
Tpr4g2105 1154 SUPERFAMILY Protein kinase-like (PK-like) 746 1043 IPR011009 -
Tpr4g2105 1154 Gene3D Ribonuclease Inhibitor 358 595 IPR032675 -
Tpr4g2105 1154 SUPERFAMILY RNI-like 268 585 - -
Tpr4g2105 1154 SMART serkin_6 757 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2105 1154 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Tpr4g2105 1154 ProSiteProfiles Protein kinase domain profile. 757 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2105 1154 SUPERFAMILY L domain-like 51 307 - -
Tpr4g2105 1154 Gene3D Transferase(Phosphotransferase) domain 1 834 1062 - -
Tpr4g2105 1154 PANTHER OS08G0446200 PROTEIN 4 1054 - -
Tpr4g2105 1154 Gene3D Ribonuclease Inhibitor 185 285 IPR032675 -
Tpr4g2105 1154 SMART LRR_typ_2 142 166 IPR003591 -
Tpr4g2105 1154 SMART LRR_typ_2 190 214 IPR003591 -
Tpr4g2105 1154 SMART LRR_typ_2 405 429 IPR003591 -
Tpr4g2105 1154 SMART LRR_typ_2 94 118 IPR003591 -
Tpr4g2105 1154 Pfam Protein kinase domain 761 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2105 1154 ProSitePatterns Protein kinases ATP-binding region signature. 763 785 IPR017441 GO:0005524
Tpr4g2105 1154 Gene3D Ribonuclease Inhibitor 286 357 IPR032675 -
Tpr4g2105 1154 Pfam Leucine rich repeat 167 227 IPR001611 GO:0005515
Tpr4g2105 1154 Pfam Leucine rich repeat 359 418 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2105 Tpr-Chr4 21830513 21835412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2105 15 1042 Receptor kinase-like Gene Family AT1G17750 34.909 4.15e-172 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g2105 Pkinase 9.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2105 - - mtr:MTR_5g087340 1781.15