Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2104 ATGGAGTTCATGGATATGGATTGCACATACCCTATAAAAGCCAAACTGAGAAAAAGCCAAACTGATATAAAAGAATCAGGAGTTTGCATTTCTGTTTATCTGTTTACGGCATTATCGTATTCTGCTGCTGCTGCTGCTGCGTCGTGTATATTGCGTTTATGGTTGAAACGAAAACGAAATCTGGTTTATGCGATATGGTTTCACCCTTTTTTTTTACTTCGAAACCTTTGGAGTCCAAATATCCCGCCAAATCTTTGCTTTGGAAAGAATTTGTGTGAGCTCAATATGGGAACCAGTCAACTACAAGGTTCCATACCTTCTGATATAGGAAGATGTAAAACTCTAAAGAGATTGATTCTCGACGAGAATAATTTTAGCGGCCCTCTTCCTTATTTTGAAAGGAATCTGAACCTGAAATACATGGACATAAGCAAGAACAATATCAGTGGACTAATTCCATCAAGTTTGGGAAATTGCACAAGTCTCACATATATTAATTTGTCATGGAACAAATTTGCTGGACTCGTACCATCAGAGCTTGGAAACCTTGTGAATCTTGTGATTTTGGATCTTTCTCATAATAACTTGCAAGGTTCTTTGCCACTTCGGTTGTCAAATTGTACTAAACTGGATCGTTTTGATGTGGGATTCAATTTCCTAAATGGATCACTCCCATCAAGTTTTAGAACTTGGACAGAAATAACCACATTGATTTTAAGAGAAAATCACTTCACAGGAGCTATACCAGGGTTTTTGGCAGAACTTAGCAACCTTCGCGAGTTACAACTTGGAGGAAATTTGTTTGGAGGCAAAATTCCTCGATCGATGGGGAAATTGCATAATTTGTTCTACGGATTGAATCTGAGTGCTAATGGATTGATAGGTGACATTCCTTCAGAAATCAGGAAGCTTGGACTGCTTCAAAGTCTGGATATATCCTTGAACAATTTATCCGGAAGCATAGATGCTCTTGAAAATCTTGTTTCATTAATTGAGTTCAATATTTCTTACAATCTCTTCAATGGTTCTGTACCAGAAACACTAATGAAGTTATTGTATTCCTCGCCATCATCATTCATGGGTAATCCTCTCCTATGTGTCAGTTGTTTGAGTTGCATAAAAACTAGTTATATAAATCCATGTGTTGACAAATCAACTGATCACAAAGGTATCAGTAATGTTCAAATTGTAATGATAGAACTTGGATCCTCAATATTGATTTCTGCTATTCTATTTCTGGTAATAATAATTCAAAGGCATTTCCATAGAAATGAAACAGATACGAAAGATCTAAACCAATGGTATTATATTGATAGAGGAGCTGGAAGGATTGGAGTCAGATATGCTCACGAATCGAACATCTTAGGTGAAGAGAATCCAACCGCCCTTCCGAATCTAGTGTTGCAAGCTACAGAGAACCTAAGTGATCAGTATATTATTGGCAGAGGAGCTCATGGTATTGTGTACAAAGCTTTACTTGGTCAACATGTTTTTGCTGTAAAGAAGTTTGAATTCACAAGGAGAAGGGAAAAGCAACTACGTATGATGCGAAAAGAAATTGAAGTGCTTGGAATGTATAAGCATCGAAACTTAATCAAATATGCAGACTATTGGATTGGAGCTGACTATGGTTTAGTCTTATATGAATTCATAGAAAATGGAAGCCTTCATGATATTTTGCATGAAAAGAACCCCCCACCACCCTTAACGTGGAAAGCCAGGTTTAACATAGCTGTTGGAATTGCTGAAGGAATTGCATATCTGCATAACAATTGTGTCCCACCCATAGTGCATCGAGACATTAAACCAAAAAATATTCTTATTGATGACAATATGGAGCCAATTATAGCTGATTTTGGTACTGCCCTATACAGGAAGTTGTCTGAAGATTCTTATAGTTATTCCGAAACCAGGAAAATGCTTTCAACTATCGTTGTTGGTACCCCTGGCTATATTGCTCCAGAGAATGCATATGTGATAGTGCAGAGCAGAAAGTCTGATGTATATAGCTACGGCATTGTTTTGCTCGAGATAATAACCAGAAAGAGAGTGGTAGTTCCCTGTTTGAATGATGAGTCAAACGTGACCTCTTTAGTGAGCTGGGCTAGATCTGTATGGCTGGAAACAGGCAAAATTGAGTTCATTGCTGATTCATATCTTGCTGAAGCATTTCCCAATTCATCAGCACTGAGAAAGCAAGTCACAACAATGTTTTTATTGGCATTGCAATGCACAGAGAAGGATCTACGAAGGAGACCAACCATGAAAGATGTTATTGGCTTGTATAAAAGGGACATGTTTAAGTGGTGTGATGAGGAGGAATACAGTGATACGGTTGGAGCTGATATATCATTACCACCATATGGTACTAATATTTTCCCTATCATTCCAGTTGTTAGCATTGACCACCATATACATGGAGAAAGCAGTAGGGCTGCAGCTCAAAGACAAAGAGAAGTTACATTTACTGTGGAGGCTGAATCCATGGATTATATTGACTTTCGCTTATGGCAGGACTTTGATCAAGTTCGATATGGATTATGTCTTGAAGATGATTGGAGTCGCATACCTACCATTTATATTGATGGACTTTTAGTTAAACTGATGGGAAATGGTAAGATAATGGCTGAAAATGTTTTGGTCGTAGCTGCTATGAATGTTCCAAAAGTAACCTATGTTTGGCCTAGTTTGATTTTCCTTCCTTCTGTCGTTGGTCCAATAGTAACCAAACCTTTCAATTGGTTTTTTCTCTTACGTTGGGGCCAATATATGCACCTTCGTAAATCCTTGTCTTATCAACCCAAATCGTACTTCATAAATGCCAATAAAATCAATGCCCTTCAGGACCTAATACTGGAAGCTACAGAGAACCTAAATGATCGGTATATTATTGGTAGAAAAGCACATTATAGTGTGTACAAAGTCATACTTGGTCAACAAGTGTTTGCTTTAAAGAAGTTTGAATTTGGAAAGAACGAGCAAAAGCAGCTAAGTATCTTGTGCAACGAAATTGAAGTCCTTGGAATGTTTAAGCATCGAAATTTAATCACATACACAGACTACTGGATTGGAGGCCATTATGGTTTAATCTTATGTAAATTCATGGAAAACGGAAGCCTTGAGGATATTTTGCATGAGAAGAAACCCTCACTGCCAATTACGTGGAGCGACCGGTTTAAGATTGCTGTTGGAATTGCTAAAGGTTTAGCACATCTGCATTACAATTGTATGCTACCCTTAATGCACGGAGACATCAAACCAAAGAACATATTTCTTGATGCGAATATGGAGCCTATTATAGCTGGTTTTGGTACTGGCCTGATATGGGACCTGTCTAAGGTTTCATATAGTCACTCTGAAACCAGCCAAATGTTGTCGTTGCACGTTATTGGTACCCCGGGTTATATTGCACCAGAGAATGCATATATCGTGGGGCAGGGAAGAAAATCTGATGTATATAGCTACGGAGTTGTTTTGCTCGAGCTAATAACCAGAAAGAGAGTGTTTGTTTTCTCTTTGAATGATGCGACAACTTCAGTGAGTTGGGCTAGATCTATATGGCTGGAAACAGGCAAAATTGAGAATATTGTTGATCCATACCTTGCAAATTCATTTCCCAATTCAGCAGCACTAGCCAAACAAGTGACGAAAGTGTTTTTATTGGCATTACAATGCACGGATCGGGACCTACGAAATAGACCGACCATGAAAGATGTTGTTGACATGTATAATAGTGACTTGTTTAACTGGAGTCGTGGCGAGGTCGAACATCGTGATGGAGTTGCAGCTAATCATAATGCAAGTGGTCAATTGTCATAA 3819 0.3833 MEFMDMDCTYPIKAKLRKSQTDIKESGVCISVYLFTALSYSAAAAAASCILRLWLKRKRNLVYAIWFHPFFLLRNLWSPNIPPNLCFGKNLCELNMGTSQLQGSIPSDIGRCKTLKRLILDENNFSGPLPYFERNLNLKYMDISKNNISGLIPSSLGNCTSLTYINLSWNKFAGLVPSELGNLVNLVILDLSHNNLQGSLPLRLSNCTKLDRFDVGFNFLNGSLPSSFRTWTEITTLILRENHFTGAIPGFLAELSNLRELQLGGNLFGGKIPRSMGKLHNLFYGLNLSANGLIGDIPSEIRKLGLLQSLDISLNNLSGSIDALENLVSLIEFNISYNLFNGSVPETLMKLLYSSPSSFMGNPLLCVSCLSCIKTSYINPCVDKSTDHKGISNVQIVMIELGSSILISAILFLVIIIQRHFHRNETDTKDLNQWYYIDRGAGRIGVRYAHESNILGEENPTALPNLVLQATENLSDQYIIGRGAHGIVYKALLGQHVFAVKKFEFTRRREKQLRMMRKEIEVLGMYKHRNLIKYADYWIGADYGLVLYEFIENGSLHDILHEKNPPPPLTWKARFNIAVGIAEGIAYLHNNCVPPIVHRDIKPKNILIDDNMEPIIADFGTALYRKLSEDSYSYSETRKMLSTIVVGTPGYIAPENAYVIVQSRKSDVYSYGIVLLEIITRKRVVVPCLNDESNVTSLVSWARSVWLETGKIEFIADSYLAEAFPNSSALRKQVTTMFLLALQCTEKDLRRRPTMKDVIGLYKRDMFKWCDEEEYSDTVGADISLPPYGTNIFPIIPVVSIDHHIHGESSRAAAQRQREVTFTVEAESMDYIDFRLWQDFDQVRYGLCLEDDWSRIPTIYIDGLLVKLMGNGKIMAENVLVVAAMNVPKVTYVWPSLIFLPSVVGPIVTKPFNWFFLLRWGQYMHLRKSLSYQPKSYFINANKINALQDLILEATENLNDRYIIGRKAHYSVYKVILGQQVFALKKFEFGKNEQKQLSILCNEIEVLGMFKHRNLITYTDYWIGGHYGLILCKFMENGSLEDILHEKKPSLPITWSDRFKIAVGIAKGLAHLHYNCMLPLMHGDIKPKNIFLDANMEPIIAGFGTGLIWDLSKVSYSHSETSQMLSLHVIGTPGYIAPENAYIVGQGRKSDVYSYGVVLLELITRKRVFVFSLNDATTSVSWARSIWLETGKIENIVDPYLANSFPNSAALAKQVTKVFLLALQCTDRDLRNRPTMKDVVDMYNSDLFNWSRGEVEHRDGVAANHNASGQLS* 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2104 1272 Gene3D Ribonuclease Inhibitor 69 376 IPR032675 -
Tpr4g2104 1272 ProSiteProfiles Protein kinase domain profile. 474 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2104 1272 ProSitePatterns Protein kinases ATP-binding region signature. 480 502 IPR017441 GO:0005524
Tpr4g2104 1272 Pfam Leucine rich repeat 137 196 IPR001611 GO:0005515
Tpr4g2104 1272 Coils Coil 307 327 - -
Tpr4g2104 1272 Gene3D Phosphorylase Kinase; domain 1 460 550 - -
Tpr4g2104 1272 PANTHER OS08G0446200 PROTEIN 74 769 - -
Tpr4g2104 1272 PANTHER OS08G0446200 PROTEIN 934 1251 - -
Tpr4g2104 1272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1080 1092 IPR008271 GO:0004672|GO:0006468
Tpr4g2104 1272 SMART serkin_6 474 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2104 1272 SMART serkin_6 958 1248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2104 1272 SUPERFAMILY Protein kinase-like (PK-like) 947 1243 IPR011009 -
Tpr4g2104 1272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Tpr4g2104 1272 SUPERFAMILY L domain-like 60 372 - -
Tpr4g2104 1272 Gene3D Phosphorylase Kinase; domain 1 922 1034 - -
Tpr4g2104 1272 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 74 769 - -
Tpr4g2104 1272 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 934 1251 - -
Tpr4g2104 1272 Gene3D Transferase(Phosphotransferase) domain 1 551 775 - -
Tpr4g2104 1272 Gene3D Transferase(Phosphotransferase) domain 1 1035 1256 - -
Tpr4g2104 1272 ProSiteProfiles Protein kinase domain profile. 958 1248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2104 1272 SUPERFAMILY Protein kinase-like (PK-like) 464 759 IPR011009 -
Tpr4g2104 1272 Pfam Protein kinase domain 964 1241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2104 1272 Pfam Protein kinase domain 478 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2104 Tpr-Chr4 21814557 21830681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2104 75 773 Receptor kinase-like Gene Family AT1G73080 45.518 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g2104 Pkinase 1.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2104 - - mtr:MTR_5g087360 1782.69