Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2103 AGCAGAGACAAGATAGCCGTTCCTCTTTTAGACAAGAAAATTGTGAAGAAGCGGGTCAAGAGATTCATCAGGCCTCAAAGTGACAGGAAAATATGTGTCAAGCCAAGCTGGCGCAGACCCAAGGGTATTGATTCACATGTTAGGAGGAAGTTCAAGGGAGTTACTTTGATGCCAAACATTGGTTATGGCTCAGACAAGAAGACCCGCCACTATCTGCCCAATGGATTCAAGAAGTTCCTTGTCCACAATGTCAAGGATCTTGAACTTTTGATGATGCATAACCGAACTTACTGTGCTGAGATTGCACACAATGTGTCAACAAGGTTAAGAAAGGCTATTGTTGAACGTGCTGCTCAATTGGACGTTGTTGTGACCAACAAACTGGCTAGGTTGCGCAGCCAAGAAGACGAGTGA 414 0.4469 SRDKIAVPLLDKKIVKKRVKRFIRPQSDRKICVKPSWRRPKGIDSHVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFLVHNVKDLELLMMHNRTYCAEIAHNVSTRLRKAIVERAAQLDVVVTNKLARLRSQEDE* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2103 137 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 5 137 IPR001515 GO:0003735|GO:0005840|GO:0006412
Tpr4g2103 137 SUPERFAMILY Ribosomal protein L32e 6 135 IPR036351 -
Tpr4g2103 137 SMART Ribosomal_L32e_2 19 126 IPR001515 GO:0003735|GO:0005840|GO:0006412
Tpr4g2103 137 CDD Ribosomal_L32_L32e 22 126 IPR001515 GO:0003735|GO:0005840|GO:0006412
Tpr4g2103 137 Pfam Ribosomal protein L32 20 126 IPR001515 GO:0003735|GO:0005840|GO:0006412
Tpr4g2103 137 PANTHER 60S RIBOSOMAL PROTEIN L32-1 5 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2103 Tpr-Chr4 21813806 21814310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2103 5 137 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 85.714 1.00e-84 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2103 K02912 - aof:109837658 242.276