Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2081 ATGCGTCCACCAATGAAGAAAATTGATTACAAAGTTGGAGATAAAGTTGAAGTATGTAGCAAAGAAGAAGGGTTTATGGGTTCATATTATGAAGCCACAATTGCTTCTTGTCTTGATAATGGAAGATATGTGATTTGTTACAAAAATCTTCTTAAAGATGACGAGTCTGGACTTCTCACTGAAACACTTCTTCCAAAGGATCTTCGTCCATCACCGCCACGTGTTCGTAACCCTTCAAAGTTCCAACTCAATCAAACAGTTGATGTTTTTGATAACGATGGTTGGTGGGTAGGAAAAATCATCAGCGAGAAGATCCTCATGGAAAAGAATTATTACTATAATGTGTATTTTGATTATACTAATCAAACGATTTACTACCCTTGTGATAAAATTAGGGTACATCATGAGATGATGTTTAGTGGAGAGTGGTTTATGGAAGCTTAA 444 0.3581 MRPPMKKIDYKVGDKVEVCSKEEGFMGSYYEATIASCLDNGRYVICYKNLLKDDESGLLTETLLPKDLRPSPPRVRNPSKFQLNQTVDVFDNDGWWVGKIISEKILMEKNYYYNVYFDYTNQTIYYPCDKIRVHHEMMFSGEWFMEA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2081 147 Gene3D - 1 77 - -
Tpr4g2081 147 PANTHER - 8 144 - -
Tpr4g2081 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 144 - -
Tpr4g2081 147 SMART agenet_At_2 8 76 IPR014002 -
Tpr4g2081 147 SMART agenet_At_2 79 139 IPR014002 -
Tpr4g2081 147 Pfam Agenet domain 13 73 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2081 Tpr-Chr4 21597751 21598397 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2081 20 113 PHD Transcription Factor Family AT5G58610 34.211 7.94e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2081 - - mtr:MTR_4g079980 229.95