Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2077 ATGGATGTTCATGTGATAACTATTGGAGAAGGAAGTGGATCTATGGAAAATAACGGGCATGCTGAACTTGAAGTAAATGATGTTGGAAACTCTGGATCTCATGCTGAGGATGTGGTTTCTTCTGAGCCGTATTTGGGTATGGTATTTGATTCTGAAGACTCTGCCAAAACTTTTTATAGTGAGTATGCTAAACGCTCGGGTTTCAGCTCTAAAGCTGGCTTGCATGGTCAGTTTAATGCTGATGGGACAAATATGTTTCGGGAGTTCGTGTGTAGCATGGAAGGTTTGAAAAGAAGGATGACTGAAAGTTGTGGGGCAATGCTTAGGATAGAGCAAAAGGGTCAAAATAAGTGGGTTGTTACAAAATTTGTGAGGGGACATAGTCATGCCACGGAGGTTCCTGATAGGGTGGAAAAACTTCGACCACGGAAACACTTTTCTAGTGTTGGGAGAACCATGCCTGAAACTTACAAAGGAGTGGGGCTTGTTCCAACTGGTGTCATGTATATATCTATTGATGGGCATCATGTTTCCTCCGAGAATAGTAACAAGATTAGGAATTTCCCTGCAGTTGCTGGTGGTAAAACGAGTCATCCAGTTAAAAATACCACATCGACGACTTATACTGTTAGGAAACCTATTCAAAAGAAGACATTAGGGAGGGATGCTCCGAATCTGCTGGAGTATTTTAAGAAAGTGCAAGCTGAAAACCCTGGCTTCTTCTATGCAATACAACTTGATGAAGATAATCGTATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGACCGCTTACAGTCATTTTGGTGATGCAGTTACCCTGGACACAACACATAGAGCAAATCAATATAATGTGCCATATGCTCCATTCACTGGGATAAACCATCATGGTCAGATGATTTTGTTTGGTTGTGCACTCCTTTTTGATGATTCTGAAGCTTCTTTTAGTTGGCTCTTCAAGACATTTCTAGCAGCAATGAATGACCATCACCCTATCTCTATAACTACCGATCAGGACAGATCCATACAAAAAGCAGTTTCAAAAGTTTTTCCTCAAGCACGGCACTGTATAAACAAGCGTTATGTCTTGCGAGAAGGCCACGAAAAGTTGGGCCATGTATGTCGCATGCATCCATATTTTCACTATGAACTTTATAATTGTATTAATTTGACAGAAACAATTGAGGAGTTTGATTTTTCTTGGAATTCTATCATTGATAAATATGAACTCAGAGGGCATGATTGGCTTCGGTCCTTGTATAGTGCTCGTGATCAGTGGGTTCCAGCATATTTCCGTGATTCATTTTTCGCTGTACTATCTCCTAATCAAGGATTTGAAGCTTCTTTTTTAGATGGTTTTGTCAACCGGCATACAACATTACCAATGTTCTTTAGGCAGTATGAACTAGCTTTGGAGAGATGGTTTGAAAAGGAAATAGAATCAGATTTTGAGACAATTAGCACTACACCGGTTCTAAAGACACCTTCGCCCATGGAGAATCAGGTTGCCAAGCTTTATACACAGAAAGTATTTTTGAAGTTTCAAGAAGAGCTAGTGGAAACTTTTGCTTATACTGCCAACAGCATCGAAGAGGATGGGGGAAATAGCATATTTAGAGTAGCAAAATTTGAGGATGACCAAAAGTCATATACTGTCACATTAAACCATTCCGAGTTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTTTTCGGGCATTCTTTGTAGGCATGTTCTAACTGTTTTCACCGTGTCTAATGTATTCACTATACCATCCCACTACATCTTAAAACGGTGGACAAGAGAGGCAAAAAGTGGTGTTGCATTGGATGGATGTGGTGGGGACTCACATGCACATGAGTCTTTGACATCACGGTATACCAATCTGTGCCGGGAGGCCATCCGCTATGCTGAGGATGGAGCAGTAGCTATGGAAACTTATGATGCTGCAATGGGTGCTCTTAGAGAAGGTGGAAAGAAAATTGCTGTCACGAAGAAAAATATTGCCAAAGTTTCACCAACAAATCATCGAGTCAGCGGGAATGCTGGTGCTGACAAGAAAACCCATGCTTCAACATCAGACACAAGTACAGCCCCTCTTTTATGGCCACCTAACGATGAAACAATGGGGTTTAATCTTAATGATGCCGGTGCTCCAGTTCAACCAGTTGCTGATCTGAATTTACCACAAACGACCCCAATGCCACATAAGCCACATAAGCGAGTTGATGTTCCACCCCCAGTGCATCATCAGAGAGTTGATAGTCCATCTCCAGTGCCTCGTCAGCGAGATGATAGTCCACGGCCAGTGCCTCGTAGGCGAGTTGATGGTCCATCCCCAATGCCTCGTCAGCGAGATGATAGTCCACCCCCAGTGCCTCGTAGGCGAGTTGATGGTCCATCCCCAATGCCTCGTCAGCGAGATGATAGTCCACCCCCAGTGCCTCTTCAGCAAGATGATGGTCCACCTGAAAACACGGTGGTTCTTCCCTGTCTGAAGTCAATGACATGGGTAATGGAGAACAAAACCTCATCCCCAGAGAACAAAGTAGCTGTTATCAATCTCAAGTTGCAAGATTATAGCAAGAGTCCATCATCAGAATACGAGGTTAAGTTCCATCTCTCTCGAGGGACTGTGGGACCTGTTTTGCAGTCTATGACTGAAGTCAGCGAACAACTTTCAACAACAGCTAATAAGGTTGCTGTAATAAACCTCAAGCTTGAAGATGCTCAGGCTTCTGGTGAGTCTGAAGTTAAGTTTCAAGTGTCCAGGGATGCATTGGGTGCTGTGCTACGATCAATGGCATATATCCGCGAGCAACTTTCTGGTGCTGTAACTGGAGACGTGCACTCAGAACCTGTGTCGAAAAAGCATCGAAAGTGA 2886 0.4307 MDVHVITIGEGSGSMENNGHAELEVNDVGNSGSHAEDVVSSEPYLGMVFDSEDSAKTFYSEYAKRSGFSSKAGLHGQFNADGTNMFREFVCSMEGLKRRMTESCGAMLRIEQKGQNKWVVTKFVRGHSHATEVPDRVEKLRPRKHFSSVGRTMPETYKGVGLVPTGVMYISIDGHHVSSENSNKIRNFPAVAGGKTSHPVKNTTSTTYTVRKPIQKKTLGRDAPNLLEYFKKVQAENPGFFYAIQLDEDNRMSNVFWADARSRTAYSHFGDAVTLDTTHRANQYNVPYAPFTGINHHGQMILFGCALLFDDSEASFSWLFKTFLAAMNDHHPISITTDQDRSIQKAVSKVFPQARHCINKRYVLREGHEKLGHVCRMHPYFHYELYNCINLTETIEEFDFSWNSIIDKYELRGHDWLRSLYSARDQWVPAYFRDSFFAVLSPNQGFEASFLDGFVNRHTTLPMFFRQYELALERWFEKEIESDFETISTTPVLKTPSPMENQVAKLYTQKVFLKFQEELVETFAYTANSIEEDGGNSIFRVAKFEDDQKSYTVTLNHSELRANCSCQMFEFSGILCRHVLTVFTVSNVFTIPSHYILKRWTREAKSGVALDGCGGDSHAHESLTSRYTNLCREAIRYAEDGAVAMETYDAAMGALREGGKKIAVTKKNIAKVSPTNHRVSGNAGADKKTHASTSDTSTAPLLWPPNDETMGFNLNDAGAPVQPVADLNLPQTTPMPHKPHKRVDVPPPVHHQRVDSPSPVPRQRDDSPRPVPRRRVDGPSPMPRQRDDSPPPVPRRRVDGPSPMPRQRDDSPPPVPLQQDDGPPENTVVLPCLKSMTWVMENKTSSPENKVAVINLKLQDYSKSPSSEYEVKFHLSRGTVGPVLQSMTEVSEQLSTTANKVAVINLKLEDAQASGESEVKFQVSRDALGAVLRSMAYIREQLSGAVTGDVHSEPVSKKHRK* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2077 961 Pfam FAR1 DNA-binding domain 57 130 IPR004330 -
Tpr4g2077 961 Pfam SWIM zinc finger 551 584 IPR007527 GO:0008270
Tpr4g2077 961 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 809 885 IPR031052 GO:0006355
Tpr4g2077 961 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 735 IPR031052 GO:0006355
Tpr4g2077 961 MobiDBLite consensus disorder prediction 673 704 - -
Tpr4g2077 961 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Tpr4g2077 961 MobiDBLite consensus disorder prediction 673 703 - -
Tpr4g2077 961 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 30 735 - -
Tpr4g2077 961 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 809 885 - -
Tpr4g2077 961 MobiDBLite consensus disorder prediction 757 773 - -
Tpr4g2077 961 Pfam MULE transposase domain 273 358 IPR018289 -
Tpr4g2077 961 MobiDBLite consensus disorder prediction 736 824 - -
Tpr4g2077 961 MobiDBLite consensus disorder prediction 806 820 - -
Tpr4g2077 961 SMART 26again6 562 589 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2077 Tpr-Chr4 21570773 21577225 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g2077 MULE 6.5e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2077 - - jre:108998633 1040.8