Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g2066 | ATGCAGGCTATATGGTTGATGCTGTTGTTGGTGGCGAATATTGCATTGGGGAATTCAGATATTGATGCACTTCTTGAACTCAAGAAGGGTATTAAAAATGACCCTTTTGGATTAGTTCTTAATTCTTGGGATTCAAAGTCATTAGACTCTAATCAATGTCCACAAAACTGGTATGGAATATTATGCAGTGATGGCAATGTTTTATCTATCACTTTGGACAATGCTGGTTTGGTTGGAGAGTTTAATTTCCTTGCAATTAGTACCCTTACAATGCTTCACAACTTGTCGCTTGTAAATAACAACTTCACAGGAAGTATGTTACATATTAGTCCGATGAAATCAATTAAATATCTCGATTTGTCTCTCAACAAGTTCACCGGCTCACTTCCTCCTAGCTTCGTCGAATTGCGTAGTTTAGTGTATCTGAATCTTTCTTCAAATGAATTTAGTGGCACTATTCCGAACGTTTTTCACAAACTTGACCAGTTGAAGTATTTAGATTTTCACTGTAATAGCTTTTCGGGCGATATTATGCATATATTTTATCAGATGGGAAGTGTGTTACATGTTGACTTAAGCAATAATAGGTTTTCTGGTACACTTGATTTGGGACTTGGAGATGTTTCGTTTCTATCTTCAATTCAACATTTGAATGTTAGTCATAATTCCTTGGTTGGTGAACTATTTGCTCATGATGGTATGCCATACCTCGATAATTTAGAGATCTTTGATGCTAGTAATAATCAGCTAGTTGGTCATATACCGTCCTTCACATTTGTTGTATCATTAAGGATTCTTCGACTTGCATGCAATCAGTTGACAGGTTCTCTGCCAGAAACTTTGTTGAAGGAAAGTTCAATGGTGTTGTCTGAACTCGATCTTAGTCAAAACAAGCTTGAAGGTTTCATTGGAATTATTACCTCGATGACTCTCAGGAAGCTTAATATATCTTCAAACAAATTGTCAGGTCCATTACCTCTCAAGGTAGGTCACTGCACCATCATAGATTTGAGTAACAACGTGCTGTCAGGTAACATGTCAAGGATCAAGTATTGGGGGAACTATGTGGAAGTTATTCAGCTAAGTACTAACTTTTTGTCAGGAACTCTGCCGAATGAAACAACACAATTTTTAAGGTTAACTTCACTTAAGGTATCCAATAACTCATTGGATGGATTTCTGCCACCAGTTTTAGGAACATATCCGGCACTAAACGAGATTGATCTTAGTCTCAACCGGCTTTCTGGTTTCCTCCTACCAACCCTTTTCTTCTCGACCAAATTGACTGCTCTTAACCTCTCAAACAATGAGTTTTCTGGTCCAATTCCTTTTCAACTTCCAAATAATAATTCATTGGTTTCTGCTGAAAGTTTCAGTTTGACGTCGCTTGATCTTTCAAACAACAATTTGAGTGGAATTCTTTCTTCGAAAATTAAGGAGCTTCATAATTTGGCATATCTCAATTTATGTAACAACAAATTGGAAGGTACTATTCCTAATGATCTTCCGGATGAATTAAGAGGATTCAATGTGTCCTTTAATAATTTTTCTGGCACTGTACCTTATAACTTATTGAAGTTTCCCGAGTCAGCATTCCATCCAGGAAATACTATGCTGCTATATCCAAATTCTCAATTATCACCAACAGATACTTCAATCTTAGGTTTGAGGTCACATAAGAAACATTTTCCTAGGAGTGTCTGGATTACATGTTTGGTCACCGGCATTTTTGTGATTGCTATTATGGCTGCAATGATTTATTATAGGATTCATCAGAAAAAAGAAAGAACTTATAAACAAGATGCAACAACAAGTGACATCGTCCAAGAGAGTACTTCTCCATCAAACAGAAGAAATTTGGAATCATTACCGCCTTCTCAAAGTGATGATTCCGGAAACATTAATCCAACCTTAAAGAAGGCTAAAGATCCTGAATTAGTTAAGAACGAGGAAGGAACGTCTTCTCCAATGTCTATTTTATCGGCTTCGAATCCTTCGCCTTCTACAAGTCATCAGTTTGAGAATCCAAGCTCCTTAAAAGTATCGTCTCCGGATAAACTGGTTGGTGACTTGCATCTATTTGATGGATCGTTGATGCTAACTGCGGAAGAGCTTTCGTGCGCTCCAGCTGAAGTTATTGGTAGGAGTTGTCATGGAACTCTCTACAAAGCTACACTTGAGTCTGGTCATGTTTTGGCTGTTAAATGGTTAAGAGAAGGAATAACGAAAGGAAAAAAGGAGTTAGCGAGGGAAATTAAGAAACTTGGGACAATCAAGCATCCAAGCTTGGTTTCTCTTCTTGGTTGCTACTTAGGGCCTAAGGAGCATGAGAGACTGATTATATCAAATTACATGAATGCATATTCATTGGACATTTATCTCCATGAGGCTGATAAAAGAAATCTCCATCCTTTGTCTGTTGATGAAAGGCTGAGGGTGGCTGTAGAAGTGGCGCGATGTTTACTTTATCTGCACACTGAGAAAGCCATACCTCATGGCAATCTTAAATCCACAAACATTCTAATAGAAACTCCCAACAGAAATGTCTTGCTCACTGACTACAGCCTACACCGAATACTCACCGCTGCTGGTACTTCCGAGCAAATTCTGAATGCCGGTGCACTTGGTTACCGACCTCCCGAGTTTGCTAGATCAACCAAACCATGCCCTTCCTTGAAAAGTGATGTATATGCATTCGGAGTTGTCTTGTTAGAGCTCATATCAGGAAGAAAATCTGGAGAAATTGTTTCCGGGATTTCTGGCGTGGTTGAACTTACGGAATGGGTGAGATTCTTAGCTGAACAAGGTCGCTCTAACCAATGCTTCGAAAAATCCCTCGTGGAAAATTACAACGGAGAAGGACCGTATATGATTCTTGATAACATGCTAAAAGTAGCTCTTAGATGCATCCTTCCAGCGTCTGAGAGACCTGATATGAAAACAGTCTTTGATGATCTTTCAACAATAAGAGAGAGTTGA | 2979 | 0.3857 | MQAIWLMLLLVANIALGNSDIDALLELKKGIKNDPFGLVLNSWDSKSLDSNQCPQNWYGILCSDGNVLSITLDNAGLVGEFNFLAISTLTMLHNLSLVNNNFTGSMLHISPMKSIKYLDLSLNKFTGSLPPSFVELRSLVYLNLSSNEFSGTIPNVFHKLDQLKYLDFHCNSFSGDIMHIFYQMGSVLHVDLSNNRFSGTLDLGLGDVSFLSSIQHLNVSHNSLVGELFAHDGMPYLDNLEIFDASNNQLVGHIPSFTFVVSLRILRLACNQLTGSLPETLLKESSMVLSELDLSQNKLEGFIGIITSMTLRKLNISSNKLSGPLPLKVGHCTIIDLSNNVLSGNMSRIKYWGNYVEVIQLSTNFLSGTLPNETTQFLRLTSLKVSNNSLDGFLPPVLGTYPALNEIDLSLNRLSGFLLPTLFFSTKLTALNLSNNEFSGPIPFQLPNNNSLVSAESFSLTSLDLSNNNLSGILSSKIKELHNLAYLNLCNNKLEGTIPNDLPDELRGFNVSFNNFSGTVPYNLLKFPESAFHPGNTMLLYPNSQLSPTDTSILGLRSHKKHFPRSVWITCLVTGIFVIAIMAAMIYYRIHQKKERTYKQDATTSDIVQESTSPSNRRNLESLPPSQSDDSGNINPTLKKAKDPELVKNEEGTSSPMSILSASNPSPSTSHQFENPSSLKVSSPDKLVGDLHLFDGSLMLTAEELSCAPAEVIGRSCHGTLYKATLESGHVLAVKWLREGITKGKKELAREIKKLGTIKHPSLVSLLGCYLGPKEHERLIISNYMNAYSLDIYLHEADKRNLHPLSVDERLRVAVEVARCLLYLHTEKAIPHGNLKSTNILIETPNRNVLLTDYSLHRILTAAGTSEQILNAGALGYRPPEFARSTKPCPSLKSDVYAFGVVLLELISGRKSGEIVSGISGVVELTEWVRFLAEQGRSNQCFEKSLVENYNGEGPYMILDNMLKVALRCILPASERPDMKTVFDDLSTIRES* | 993 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g2066 | 992 | Gene3D | Ribonuclease Inhibitor | 19 | 180 | IPR032675 | - | |
Tpr4g2066 | 992 | PANTHER | OS07G0626500 PROTEIN | 1 | 990 | - | - | |
Tpr4g2066 | 992 | MobiDBLite | consensus disorder prediction | 651 | 681 | - | - | |
Tpr4g2066 | 992 | ProSiteProfiles | Protein kinase domain profile. | 707 | 989 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g2066 | 992 | Gene3D | Ribonuclease Inhibitor | 356 | 456 | IPR032675 | - | |
Tpr4g2066 | 992 | Gene3D | Phosphorylase Kinase; domain 1 | 705 | 784 | - | - | |
Tpr4g2066 | 992 | MobiDBLite | consensus disorder prediction | 598 | 681 | - | - | |
Tpr4g2066 | 992 | Gene3D | Transferase(Phosphotransferase) domain 1 | 785 | 992 | - | - | |
Tpr4g2066 | 992 | ProSiteProfiles | Leucine-rich repeat profile. | 459 | 480 | IPR001611 | GO:0005515 | |
Tpr4g2066 | 992 | SUPERFAMILY | L domain-like | 40 | 342 | - | - | |
Tpr4g2066 | 992 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 1 | 990 | - | - | |
Tpr4g2066 | 992 | SUPERFAMILY | L domain-like | 334 | 527 | - | - | |
Tpr4g2066 | 992 | Gene3D | Ribonuclease Inhibitor | 181 | 355 | IPR032675 | - | |
Tpr4g2066 | 992 | Pfam | Leucine rich repeat N-terminal domain | 18 | 63 | IPR013210 | - | |
Tpr4g2066 | 992 | Pfam | Leucine Rich Repeat | 459 | 479 | IPR001611 | GO:0005515 | |
Tpr4g2066 | 992 | Pfam | Leucine rich repeat | 92 | 148 | IPR001611 | GO:0005515 | |
Tpr4g2066 | 992 | PRINTS | Leucine-rich repeat signature | 460 | 473 | - | - | |
Tpr4g2066 | 992 | PRINTS | Leucine-rich repeat signature | 481 | 494 | - | - | |
Tpr4g2066 | 992 | Gene3D | Ribonuclease Inhibitor | 457 | 543 | IPR032675 | - | |
Tpr4g2066 | 992 | SUPERFAMILY | Protein kinase-like (PK-like) | 710 | 986 | IPR011009 | - | |
Tpr4g2066 | 992 | MobiDBLite | consensus disorder prediction | 602 | 635 | - | - | |
Tpr4g2066 | 992 | Pfam | Protein tyrosine and serine/threonine kinase | 711 | 985 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g2066 | Tpr-Chr4 | 21446104 | 21451730 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g2066 | 69 | 989 | Receptor kinase-like Gene Family | AT5G07280 | 29.082 | 3.19e-74 | 265 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Tpr4g2066 | PK_Tyr_Ser-Thr | 2.7e-29 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g2066 | - | - | cam:101512473 | 1550.8 |