Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2066 ATGCAGGCTATATGGTTGATGCTGTTGTTGGTGGCGAATATTGCATTGGGGAATTCAGATATTGATGCACTTCTTGAACTCAAGAAGGGTATTAAAAATGACCCTTTTGGATTAGTTCTTAATTCTTGGGATTCAAAGTCATTAGACTCTAATCAATGTCCACAAAACTGGTATGGAATATTATGCAGTGATGGCAATGTTTTATCTATCACTTTGGACAATGCTGGTTTGGTTGGAGAGTTTAATTTCCTTGCAATTAGTACCCTTACAATGCTTCACAACTTGTCGCTTGTAAATAACAACTTCACAGGAAGTATGTTACATATTAGTCCGATGAAATCAATTAAATATCTCGATTTGTCTCTCAACAAGTTCACCGGCTCACTTCCTCCTAGCTTCGTCGAATTGCGTAGTTTAGTGTATCTGAATCTTTCTTCAAATGAATTTAGTGGCACTATTCCGAACGTTTTTCACAAACTTGACCAGTTGAAGTATTTAGATTTTCACTGTAATAGCTTTTCGGGCGATATTATGCATATATTTTATCAGATGGGAAGTGTGTTACATGTTGACTTAAGCAATAATAGGTTTTCTGGTACACTTGATTTGGGACTTGGAGATGTTTCGTTTCTATCTTCAATTCAACATTTGAATGTTAGTCATAATTCCTTGGTTGGTGAACTATTTGCTCATGATGGTATGCCATACCTCGATAATTTAGAGATCTTTGATGCTAGTAATAATCAGCTAGTTGGTCATATACCGTCCTTCACATTTGTTGTATCATTAAGGATTCTTCGACTTGCATGCAATCAGTTGACAGGTTCTCTGCCAGAAACTTTGTTGAAGGAAAGTTCAATGGTGTTGTCTGAACTCGATCTTAGTCAAAACAAGCTTGAAGGTTTCATTGGAATTATTACCTCGATGACTCTCAGGAAGCTTAATATATCTTCAAACAAATTGTCAGGTCCATTACCTCTCAAGGTAGGTCACTGCACCATCATAGATTTGAGTAACAACGTGCTGTCAGGTAACATGTCAAGGATCAAGTATTGGGGGAACTATGTGGAAGTTATTCAGCTAAGTACTAACTTTTTGTCAGGAACTCTGCCGAATGAAACAACACAATTTTTAAGGTTAACTTCACTTAAGGTATCCAATAACTCATTGGATGGATTTCTGCCACCAGTTTTAGGAACATATCCGGCACTAAACGAGATTGATCTTAGTCTCAACCGGCTTTCTGGTTTCCTCCTACCAACCCTTTTCTTCTCGACCAAATTGACTGCTCTTAACCTCTCAAACAATGAGTTTTCTGGTCCAATTCCTTTTCAACTTCCAAATAATAATTCATTGGTTTCTGCTGAAAGTTTCAGTTTGACGTCGCTTGATCTTTCAAACAACAATTTGAGTGGAATTCTTTCTTCGAAAATTAAGGAGCTTCATAATTTGGCATATCTCAATTTATGTAACAACAAATTGGAAGGTACTATTCCTAATGATCTTCCGGATGAATTAAGAGGATTCAATGTGTCCTTTAATAATTTTTCTGGCACTGTACCTTATAACTTATTGAAGTTTCCCGAGTCAGCATTCCATCCAGGAAATACTATGCTGCTATATCCAAATTCTCAATTATCACCAACAGATACTTCAATCTTAGGTTTGAGGTCACATAAGAAACATTTTCCTAGGAGTGTCTGGATTACATGTTTGGTCACCGGCATTTTTGTGATTGCTATTATGGCTGCAATGATTTATTATAGGATTCATCAGAAAAAAGAAAGAACTTATAAACAAGATGCAACAACAAGTGACATCGTCCAAGAGAGTACTTCTCCATCAAACAGAAGAAATTTGGAATCATTACCGCCTTCTCAAAGTGATGATTCCGGAAACATTAATCCAACCTTAAAGAAGGCTAAAGATCCTGAATTAGTTAAGAACGAGGAAGGAACGTCTTCTCCAATGTCTATTTTATCGGCTTCGAATCCTTCGCCTTCTACAAGTCATCAGTTTGAGAATCCAAGCTCCTTAAAAGTATCGTCTCCGGATAAACTGGTTGGTGACTTGCATCTATTTGATGGATCGTTGATGCTAACTGCGGAAGAGCTTTCGTGCGCTCCAGCTGAAGTTATTGGTAGGAGTTGTCATGGAACTCTCTACAAAGCTACACTTGAGTCTGGTCATGTTTTGGCTGTTAAATGGTTAAGAGAAGGAATAACGAAAGGAAAAAAGGAGTTAGCGAGGGAAATTAAGAAACTTGGGACAATCAAGCATCCAAGCTTGGTTTCTCTTCTTGGTTGCTACTTAGGGCCTAAGGAGCATGAGAGACTGATTATATCAAATTACATGAATGCATATTCATTGGACATTTATCTCCATGAGGCTGATAAAAGAAATCTCCATCCTTTGTCTGTTGATGAAAGGCTGAGGGTGGCTGTAGAAGTGGCGCGATGTTTACTTTATCTGCACACTGAGAAAGCCATACCTCATGGCAATCTTAAATCCACAAACATTCTAATAGAAACTCCCAACAGAAATGTCTTGCTCACTGACTACAGCCTACACCGAATACTCACCGCTGCTGGTACTTCCGAGCAAATTCTGAATGCCGGTGCACTTGGTTACCGACCTCCCGAGTTTGCTAGATCAACCAAACCATGCCCTTCCTTGAAAAGTGATGTATATGCATTCGGAGTTGTCTTGTTAGAGCTCATATCAGGAAGAAAATCTGGAGAAATTGTTTCCGGGATTTCTGGCGTGGTTGAACTTACGGAATGGGTGAGATTCTTAGCTGAACAAGGTCGCTCTAACCAATGCTTCGAAAAATCCCTCGTGGAAAATTACAACGGAGAAGGACCGTATATGATTCTTGATAACATGCTAAAAGTAGCTCTTAGATGCATCCTTCCAGCGTCTGAGAGACCTGATATGAAAACAGTCTTTGATGATCTTTCAACAATAAGAGAGAGTTGA 2979 0.3857 MQAIWLMLLLVANIALGNSDIDALLELKKGIKNDPFGLVLNSWDSKSLDSNQCPQNWYGILCSDGNVLSITLDNAGLVGEFNFLAISTLTMLHNLSLVNNNFTGSMLHISPMKSIKYLDLSLNKFTGSLPPSFVELRSLVYLNLSSNEFSGTIPNVFHKLDQLKYLDFHCNSFSGDIMHIFYQMGSVLHVDLSNNRFSGTLDLGLGDVSFLSSIQHLNVSHNSLVGELFAHDGMPYLDNLEIFDASNNQLVGHIPSFTFVVSLRILRLACNQLTGSLPETLLKESSMVLSELDLSQNKLEGFIGIITSMTLRKLNISSNKLSGPLPLKVGHCTIIDLSNNVLSGNMSRIKYWGNYVEVIQLSTNFLSGTLPNETTQFLRLTSLKVSNNSLDGFLPPVLGTYPALNEIDLSLNRLSGFLLPTLFFSTKLTALNLSNNEFSGPIPFQLPNNNSLVSAESFSLTSLDLSNNNLSGILSSKIKELHNLAYLNLCNNKLEGTIPNDLPDELRGFNVSFNNFSGTVPYNLLKFPESAFHPGNTMLLYPNSQLSPTDTSILGLRSHKKHFPRSVWITCLVTGIFVIAIMAAMIYYRIHQKKERTYKQDATTSDIVQESTSPSNRRNLESLPPSQSDDSGNINPTLKKAKDPELVKNEEGTSSPMSILSASNPSPSTSHQFENPSSLKVSSPDKLVGDLHLFDGSLMLTAEELSCAPAEVIGRSCHGTLYKATLESGHVLAVKWLREGITKGKKELAREIKKLGTIKHPSLVSLLGCYLGPKEHERLIISNYMNAYSLDIYLHEADKRNLHPLSVDERLRVAVEVARCLLYLHTEKAIPHGNLKSTNILIETPNRNVLLTDYSLHRILTAAGTSEQILNAGALGYRPPEFARSTKPCPSLKSDVYAFGVVLLELISGRKSGEIVSGISGVVELTEWVRFLAEQGRSNQCFEKSLVENYNGEGPYMILDNMLKVALRCILPASERPDMKTVFDDLSTIRES* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2066 992 Gene3D Ribonuclease Inhibitor 19 180 IPR032675 -
Tpr4g2066 992 PANTHER OS07G0626500 PROTEIN 1 990 - -
Tpr4g2066 992 MobiDBLite consensus disorder prediction 651 681 - -
Tpr4g2066 992 ProSiteProfiles Protein kinase domain profile. 707 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2066 992 Gene3D Ribonuclease Inhibitor 356 456 IPR032675 -
Tpr4g2066 992 Gene3D Phosphorylase Kinase; domain 1 705 784 - -
Tpr4g2066 992 MobiDBLite consensus disorder prediction 598 681 - -
Tpr4g2066 992 Gene3D Transferase(Phosphotransferase) domain 1 785 992 - -
Tpr4g2066 992 ProSiteProfiles Leucine-rich repeat profile. 459 480 IPR001611 GO:0005515
Tpr4g2066 992 SUPERFAMILY L domain-like 40 342 - -
Tpr4g2066 992 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 990 - -
Tpr4g2066 992 SUPERFAMILY L domain-like 334 527 - -
Tpr4g2066 992 Gene3D Ribonuclease Inhibitor 181 355 IPR032675 -
Tpr4g2066 992 Pfam Leucine rich repeat N-terminal domain 18 63 IPR013210 -
Tpr4g2066 992 Pfam Leucine Rich Repeat 459 479 IPR001611 GO:0005515
Tpr4g2066 992 Pfam Leucine rich repeat 92 148 IPR001611 GO:0005515
Tpr4g2066 992 PRINTS Leucine-rich repeat signature 460 473 - -
Tpr4g2066 992 PRINTS Leucine-rich repeat signature 481 494 - -
Tpr4g2066 992 Gene3D Ribonuclease Inhibitor 457 543 IPR032675 -
Tpr4g2066 992 SUPERFAMILY Protein kinase-like (PK-like) 710 986 IPR011009 -
Tpr4g2066 992 MobiDBLite consensus disorder prediction 602 635 - -
Tpr4g2066 992 Pfam Protein tyrosine and serine/threonine kinase 711 985 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2066 Tpr-Chr4 21446104 21451730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2066 69 989 Receptor kinase-like Gene Family AT5G07280 29.082 3.19e-74 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr4g2066 PK_Tyr_Ser-Thr 2.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2066 - - cam:101512473 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2066 4 21446104 21451730 Tpr4g2066 4 21446104 21451730 ECH