Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2050 ATGGAGATTTTGAGTTCTACAAAAAATATGTTGTTGATGATGATGATGAGTGCTATGATGTGGAACATGGCAAAATCTGATTTAATCTATGTTGGAGGTAGTAAGGGTAGTGGATGGGTACTTGGTAATAACTTGACCAATTGGTCATTGAATCAGCACTTTCATTTGAATGATTGGCTATACTTTGGATATGAAAAAGATAAACGCTATTTCAATGTGCTAGAGGTGAACAAAACAAGTTATGAAAACTGCATAGATGCAGGATTCATTAAGAATGTAACCGGAGGCGCCGGACGAGACGTTTTTCAGCTGACAAATAAGAAGACTTATTACTTTATAAGTGGAGGAGGTTACTGTTGGCACGGGTTGAAGGTTGCCATTCATGTTAAAGATTCTGTTGCACCAGCTCCTGCACCTAAATCTCACAAAAGTGGTGCTTCTGCTTTAGATGCTTCTAATATCTACCATTCACTTATGGTGCTCATCTTAATCTTGTTGTGCACCAACTTCTTGGGATAA 519 0.3815 MEILSSTKNMLLMMMMSAMMWNMAKSDLIYVGGSKGSGWVLGNNLTNWSLNQHFHLNDWLYFGYEKDKRYFNVLEVNKTSYENCIDAGFIKNVTGGAGRDVFQLTNKKTYYFISGGGYCWHGLKVAIHVKDSVAPAPAPKSHKSGASALDASNIYHSLMVLILILLCTNFLG* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2050 172 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Tpr4g2050 172 PANTHER BLUE COPPER PROTEIN 10 165 IPR039391 GO:0009055
Tpr4g2050 172 Gene3D - 27 134 IPR008972 -
Tpr4g2050 172 PANTHER OS03G0758500 PROTEIN 10 165 - -
Tpr4g2050 172 Pfam Plastocyanin-like domain 43 119 IPR003245 GO:0009055
Tpr4g2050 172 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2050 Tpr-Chr4 21145846 21147395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2050 24 153 Phytocyanin Superfamily AT2G27035 43.846 5.80e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2050 - - mtr:MTR_5g088180 207.608