Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2049 ATGGAGATTTTGAGTTCTACAAAAAATATGTTGATGATGATGATGATGAGTGCTATGATGTGGAACATGGTAAAATCTGATTTAATCTATGTTGGAGGGAGTAAGGGTAGTGGATGGGTACTTGGTAGAAACTTGACCAATTGGTCATTGAATCAGACATTTTATTTGAATGATTGGCTATACTTTGGATATGAAAACAACAAACTCTCTTACAATGTGCTAGAGGTGAACAAAACAAGTTATAAAAACTGCATAGATGCAGGATTCATTAAGAACGTAACCGGAGGAGCCGGACGAGACGTTTTTCATCTGACAAAGAAGAAGACTTATTACTTTTTAAGTGGAGGAGGTAACTGTTTTCAAGGGTTGAAGGTTGCCATTCATGTTAAAGATTCTGTTGCACCAGCTCCTGCACCTCACAAAAGTGGTGCATCTGCTTTAGATGCTTCTAATATCTACCATTCACTTATGGTGCTCATCTTAATCCTGATGTTCACCAACTTCTTGGGATAA 513 0.3762 MEILSSTKNMLMMMMMSAMMWNMVKSDLIYVGGSKGSGWVLGRNLTNWSLNQTFYLNDWLYFGYENNKLSYNVLEVNKTSYKNCIDAGFIKNVTGGAGRDVFHLTKKKTYYFLSGGGNCFQGLKVAIHVKDSVAPAPAPHKSGASALDASNIYHSLMVLILILMFTNFLG* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2049 170 Pfam Plastocyanin-like domain 43 122 IPR003245 GO:0009055
Tpr4g2049 170 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Tpr4g2049 170 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
Tpr4g2049 170 Gene3D - 27 134 IPR008972 -
Tpr4g2049 170 PANTHER BLUE COPPER PROTEIN 10 162 IPR039391 GO:0009055
Tpr4g2049 170 PANTHER OS03G0758500 PROTEIN 10 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2049 Tpr-Chr4 21138183 21139663 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2049 24 169 Phytocyanin Superfamily AT2G27035 41.497 9.33e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2049 - - mtr:MTR_5g088180 182.956