Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2047 ATGGCAAAATCTGAGGAACACTTTGTTGGAGGGAGTATGTTTGGATGGGACCCTATACCTTCTAATGACTTGAACAGTTGGTCATTGAATCAGCACTTTCGTGTGAATGATTGGCTATATTTTGGATATGACAAACGCTATTTCAGTGTCCTAGAGGTGAACAAAACAAGTTATGAGAACTGCATAGATGCAGGATTCATTAAGAACGTAACCGGAGGCGCTGGACGAGACGTTCTTCCCCTGACAGAGAAGAAGACTTATTACTTTATAAGTGGAGGAGATTACTGTAAGCAAGGGTTGAAGGTTGCCATTAATGTTAATGATAATGTTGCACCAGCTCCTGCACCTACATCTCACAAAAGTGGTGCTCCTTCTGCTTTAGATGCTTCTAATATCTACCATGCAATTGTGGGGCTCATCTTAATCTTGATGTTCACCAAATTCTTGGGATAA 453 0.4106 MAKSEEHFVGGSMFGWDPIPSNDLNSWSLNQHFRVNDWLYFGYDKRYFSVLEVNKTSYENCIDAGFIKNVTGGAGRDVLPLTEKKTYYFISGGDYCKQGLKVAINVNDNVAPAPAPTSHKSGAPSALDASNIYHAIVGLILILMFTKFLG* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2047 150 Pfam Plastocyanin-like domain 16 99 IPR003245 GO:0009055
Tpr4g2047 150 ProSiteProfiles Phytocyanin domain profile. 5 108 IPR003245 GO:0009055
Tpr4g2047 150 PANTHER EARLY NODULIN-LIKE PROTEIN 20 3 135 - -
Tpr4g2047 150 SUPERFAMILY Cupredoxins 5 106 IPR008972 -
Tpr4g2047 150 PANTHER BLUE COPPER PROTEIN 3 135 IPR039391 GO:0009055
Tpr4g2047 150 Gene3D - 4 111 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2047 Tpr-Chr4 21132017 21133208 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2047 2 141 Phytocyanin Superfamily AT2G27035 40.816 8.06e-30 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2047 - - mtr:MTR_5g088180 184.882