Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2044 ATGGGGATTCAAACAATGGGTTCTCAAAGTAACGGGCAACAGTCTCATTTACAGGCTAATCAGTTAGTTAAGCAAAATTCATGGTATGGTCTTACTCTCGATGAGGTTGACAATCTACTAGGAGATTTAGGAAAGCCGTTAGGGAGCATGAATCTTGACGAGCTTCTTCATAATGTATGGACTGCTGAAGGAAATAACGTTGTAGGGGTAGAGAGCGAGCATGTTTCGTCTTCGTCTTCTCTTCAACGTCAGGCTAGTATGACGTTGGCTCGTGCTTTAAGTGGGAAAACGGTGGATGATGTATGGAGAGAAATCCAGCTAGGTCAGAAGAAACAATATGGTGGAGATGATGTGAAAATTGAGGACAGGGAAATGAGTCTTGGTGGTACAACGTTGGAAGATTTTTTAGTACAAGCAGGGCTTTACGCTGGAGCTTCTGTTAGTTCGACGGTGGGGTTGGATGCAATGGATACTGCTATTCCTCAAAGCTTTCAACCGAAAACAAGCTTGTTATCCTCTTCTTCGATTAGTAGTTTGTCAGATGCAAAACCGGGTCGTAAAAGGGATGGACCTGATGCATACGAGAAGGCTCTGGAAAGGAGGCTGAGAAGGAAAATCAAGAATAGGGAATCTGCTGCTCGTTCACGAGCAAGAAAACAGGCTTACCATAATGAACTGGTTACCAAGGTTACTCTGCTAGAACAGCAAAATACGCAGCTCAAGAAAGAGAAGGAGTTTGAGCAGAGGCTACCGCCTGAACCATCACCTGAACCGAAATATCGCCTTCGAAGGATAAGTTCTGCCCTTTTCTGA 813 0.4428 MGIQTMGSQSNGQQSHLQANQLVKQNSWYGLTLDEVDNLLGDLGKPLGSMNLDELLHNVWTAEGNNVVGVESEHVSSSSSLQRQASMTLARALSGKTVDDVWREIQLGQKKQYGGDDVKIEDREMSLGGTTLEDFLVQAGLYAGASVSSTVGLDAMDTAIPQSFQPKTSLLSSSSISSLSDAKPGRKRDGPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVTKVTLLEQQNTQLKKEKEFEQRLPPEPSPEPKYRLRRISSALF* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2044 270 CDD bZIP_plant_BZIP46 200 254 - -
Tpr4g2044 270 MobiDBLite consensus disorder prediction 240 260 - -
Tpr4g2044 270 MobiDBLite consensus disorder prediction 171 194 - -
Tpr4g2044 270 MobiDBLite consensus disorder prediction 240 270 - -
Tpr4g2044 270 Gene3D - 198 250 - -
Tpr4g2044 270 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 243 IPR004827 GO:0003700|GO:0006355
Tpr4g2044 270 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 36 267 IPR043452 GO:0003700|GO:0045893
Tpr4g2044 270 SUPERFAMILY Leucine zipper domain 200 248 IPR046347 GO:0003700|GO:0006355
Tpr4g2044 270 SMART brlzneu 196 268 IPR004827 GO:0003700|GO:0006355
Tpr4g2044 270 Pfam bZIP transcription factor 200 244 IPR004827 GO:0003700|GO:0006355
Tpr4g2044 270 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Tpr4g2044 270 Coils Coil 223 250 - -
Tpr4g2044 270 PANTHER BZIP TRANSCRIPTION FACTOR 36 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2044 Tpr-Chr4 21095181 21099178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2044 22 270 bZIP Transcription Factor Family AT3G56850 42.414 1.49e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr4g2044 bZIP_1 7.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2044 K14432 - gmx:100798549 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2044 4 21095181 21099178 Tpr4g2044 4 21095181 21099178 ECH