Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2031 ATGGGAAATTGTTTCAGAAAACCAGTTTGTCATGTTTCTTCAACAACTTTATTTGGAAATACAAAGCCTCAAAGTAAGACAAAGCAAACTTCAAATTCTCCTGATGAAAACACCGAATTGAAAACTTCAGCAACAAATGATGACGTATCCGTCTCCAATGATGTTAAGTCTTTCAGCTTCAATGATCTAAAAGAGGCGACTAGGAACTTCCGGCAAGAAAATTTAATTGGTGAGGGAGGGTTTGGTTTTGTCTTCAAAGGATGGATAGATGAGAACACCGGCGCTCCTACAAAACCAGGAAATGGAATTGTAGTTGCCATTAAGAGGCTTAAACCAGAAAGTTTTCAAGGTCACAAAGAATGGCTTGCAGAAGTTAATTATCTAGGCCAACTTCACCATGAAAATTTGGTGAGGCTTATTGGTTACTGTTCAGAAGGGAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTCTGGAAAATCACTTATTCAGAAAAGGTGTTCAACCGATTTCATGGATGACACGGATCAATATTGCGATTGGTGTAGCAAGAGGACTAGCATTTTTACATTCCCTTGATGCAAATGTTATTTATCGCGATTTAAAGGCTTCCAATATCCTACTTGATTCGGATTTCAATGCAAATCTCTCGGATTTTGGCTTAGCAAGAGATGGTCCAACCGGAGATAACACTCATGTTTCAACTCGAATTATCGGAACTCATGGTTATGCTGCACCAGAGTATGTAGCCACAGGTCATTTAACAGCAAGGAGCGATGTATACAGCTTCGGCGTTGTCTTGTTAGAGTTACTAACAGGACGACGTGTGGTTGACGAAGATAGACCTGGATACTCGGAAGAGACGCTTGTGGATTGGGCAATGCCTTTTCTAAGTGACAACAGAAGAATATTGAGAATCATGGATACAAAGTTAGGTGGTCAATACTCGAAAAAAGGAGCACAAGCTGCAGCTGCACTTATTCTAAATTGTGTTAATACTGATCCTAAACATAGACCAACTATGGTAAATGTTTTATCGGCATTGGAAGCGTTACATTCGTCAAATTCATTTCCAAGGACACCAAAATCTGGAACTGATAATCATCATCATGGAACCAAACATTCTAGTCATCATCATCATTCACATAAGTCAATTACTAATAATAATAGAAAACATTGA 1188 0.3864 MGNCFRKPVCHVSSTTLFGNTKPQSKTKQTSNSPDENTELKTSATNDDVSVSNDVKSFSFNDLKEATRNFRQENLIGEGGFGFVFKGWIDENTGAPTKPGNGIVVAIKRLKPESFQGHKEWLAEVNYLGQLHHENLVRLIGYCSEGKNRLLVYEFMQKGSLENHLFRKGVQPISWMTRINIAIGVARGLAFLHSLDANVIYRDLKASNILLDSDFNANLSDFGLARDGPTGDNTHVSTRIIGTHGYAAPEYVATGHLTARSDVYSFGVVLLELLTGRRVVDEDRPGYSEETLVDWAMPFLSDNRRILRIMDTKLGGQYSKKGAQAAAALILNCVNTDPKHRPTMVNVLSALEALHSSNSFPRTPKSGTDNHHHGTKHSSHHHHSHKSITNNNRKH* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2031 395 PANTHER OS01G0588500 PROTEIN-RELATED 17 381 - -
Tpr4g2031 395 Gene3D Transferase(Phosphotransferase) domain 1 156 374 - -
Tpr4g2031 395 ProSitePatterns Protein kinases ATP-binding region signature. 76 108 IPR017441 GO:0005524
Tpr4g2031 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Tpr4g2031 395 MobiDBLite consensus disorder prediction 374 395 - -
Tpr4g2031 395 MobiDBLite consensus disorder prediction 362 395 - -
Tpr4g2031 395 MobiDBLite consensus disorder prediction 19 47 - -
Tpr4g2031 395 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 381 - -
Tpr4g2031 395 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2031 395 CDD STKc_IRAK 76 354 - -
Tpr4g2031 395 SUPERFAMILY Protein kinase-like (PK-like) 46 357 IPR011009 -
Tpr4g2031 395 Pfam Protein tyrosine and serine/threonine kinase 73 350 IPR001245 GO:0004672|GO:0006468
Tpr4g2031 395 Gene3D Phosphorylase Kinase; domain 1 44 155 - -
Tpr4g2031 395 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2031 Tpr-Chr4 20966692 20969710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2031 20 351 Glycoside Hydrolase AT3G07070 48.368 7.21e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr4g2031 PK_Tyr_Ser-Thr 6.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2031 - - gmx:102664409 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2031 4 20966692 20969710 Tpr4g2031 4 20966692 20969710 ECH