Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2021 ATGCTAAAATTCTTCACCACCACCGCACTTGTTCCCACCAAGAACAACATTTTGCTCCTATTCACAACACCATCTTCAAAACATCACTACCCATCAATTTTCAAATTCTTCACCACTTCAACCACCACCATCGACCCACAATCTTTCACCGTCTCTTACCTCATCAACAACATCGGTTTCACCCCACAAACCGCTTCCAAAGCTTCCCAATATCTCTCTTTCTCCAACTCCCAAAAACCCGATTCAGTTCTCACCTTTTTCACAACCCATGGTTTCTCTAACTCTCAAATACGAAGCATCATCAAAAGGGAACCCCAGTTACTCTCATTCAAACCCAACACCATTTTGTTACCAAAGTTTCAATTTTTACTCTCCAAAGGTGTTTCTAACTCTGATCTTGTTCGTATTGTTAATTCTAACCCTAGATTTCTTAGTAGAAGTTTACAGAATCATATCATTCCTACTTATGAATGTGCAAAAGGGTTTCTTCAATCTGACAAAAAAATTATTGCTTGTGTTAAACGTTATTGTTTTCTTTCTCAATATGATTTGCCTAACAAGGTTAAATTGTTGCTTGATAATGGAGTTTCTCATTCAAATATTGCTAGATTGTTTCAATGGTGGCCTAGTATATTTGACTCATCAGATTTGTTAAACACTGTTGAGGAATTGAAGCAGCTCGGTTTCGATTCTAAAACTTCCACTTTTAGTATAGCGTTTCTTGCTAAGAAAACTGTTACTAAAGCTAAGTGGGATGAGAAAGTTGAAACCTTTAAGAAATGGGGTTGGTCTGATGAACATATTCTTCAAGCATTTAAGAAGCAACCTTTTTGTATGCTGTCATCCCTTCGTAAAATGAATGCAATCATGAATTTTTGGGTTAATCACTTAGGTTTCAATTCTTTGGACCTTGCTAGATTTCCTGGAATTTTGCAGTGCAGTCTTGAGAAGAGGATTGTTCCTAGAGGTTTAGTTGTCCAGTTTCTTATCTCAAAAGGCCTTCGACGAAAGGATGCAAGTATATATACACCATTTGTTGGATCTGAGAAGTTGTTTGTGGAAAAGTTTGTGAACCGTTTTGTGGAGCATTCTTCTGATCTGTTAAAGCTTTACGAGGGAAAAATGAATCTTGCAGATAGCAGGAACGGCCTTCAGATGGTTGATCAAATTTTGGTTTGA 1179 0.3732 MLKFFTTTALVPTKNNILLLFTTPSSKHHYPSIFKFFTTSTTTIDPQSFTVSYLINNIGFTPQTASKASQYLSFSNSQKPDSVLTFFTTHGFSNSQIRSIIKREPQLLSFKPNTILLPKFQFLLSKGVSNSDLVRIVNSNPRFLSRSLQNHIIPTYECAKGFLQSDKKIIACVKRYCFLSQYDLPNKVKLLLDNGVSHSNIARLFQWWPSIFDSSDLLNTVEELKQLGFDSKTSTFSIAFLAKKTVTKAKWDEKVETFKKWGWSDEHILQAFKKQPFCMLSSLRKMNAIMNFWVNHLGFNSLDLARFPGILQCSLEKRIVPRGLVVQFLISKGLRRKDASIYTPFVGSEKLFVEKFVNRFVEHSSDLLKLYEGKMNLADSRNGLQMVDQILV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2021 392 PANTHER CGI-12 PROTEIN-RELATED 22 380 IPR003690 GO:0003690|GO:0006355
Tpr4g2021 392 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 380 - -
Tpr4g2021 392 Gene3D Transcription termination factor 3, mitochondrial 165 369 IPR038538 -
Tpr4g2021 392 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Tpr4g2021 392 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Tpr4g2021 392 SMART mt_12 31 61 IPR003690 GO:0003690|GO:0006355
Tpr4g2021 392 SMART mt_12 167 197 IPR003690 GO:0003690|GO:0006355
Tpr4g2021 392 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Tpr4g2021 392 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Tpr4g2021 392 SMART mt_12 202 230 IPR003690 GO:0003690|GO:0006355
Tpr4g2021 392 Pfam mTERF 84 173 IPR003690 GO:0003690|GO:0006355
Tpr4g2021 392 Pfam mTERF 184 352 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2021 Tpr-Chr4 20864029 20867825 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr4g2021 mTERF 9.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2021 K15032 - gmx:102667698 379.793