Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2019 ATGTTTCATTACCACCGCCTCAGAACTCTGTTCTTCTACTCTCAAACCCCAAAATGTTACCTCCTTCACCCAACCCATTTTCTCAAACCATTCTCCACCTCCACCACCACTTCAGATTCAGATCAACAATCTTTCACTGTTTCCTACCTCACCAACATTTGTGGTTTATCAACACAAAACGCTCTTAAAGCATCAAAACGACTTCGTTTCAACACCCCCAAAAAACCCGATTCAGTTATGGCTTTTTTCAAAACCCACGGTTTCTCCAATGATCAGATACAATCCATCATTCACACAGCACCATCACTCTTAACATCCAAACCCATCAAAACCATTTTGCCAAAGTTTCAATTTTTATCATCCAAAGGTGCTTCTCCATCTGACATTGTTGACACCGTCACCAAAAGCCCCCATTTTTTGTGTTCAAGCCTTCAGAAACAGATAATCCCTTCTTTTGAATTGGTAAGAAGTTTCTGTCCCTCTGATCAAAAAGCTCTTACTTCAATAACTGCTTGTTCTTCTTCCATTAAATATGGCCGCATGAGACTAAATGTCAAATTTTTGCTTGATCTTGGGGTCACTTCTTCAGGCATTTACCGTTTGCTTACTACTAGACCTTCTGTAATTTGTTCTGCTAATTTGAAAAAGTATGTTGAAGAGATTAAGGAATTAGGGTTTAATCCTTCTAAATGCAGTTTTTGTGTGGCATTATTGGCCAAAACGGCCGTCACCAAATCCCAATGGGATGCAAAAGTTGATGCTTTGAAGAGTTGGGGTTTTTCTGAAGATGAAATTTTTAATGCTTTTAAAAAACAGCCTAATTTTATGCTAAGGTCTACGGACAAACTTAATGCGGTGATGCGTTTTTGGATCAAACAGCTTGGTTGGGATCGTTTATTGCTTCTGGTAGCTCCCGATCTTTTCGGATTTAGCATAGAGAAAAGGCTTATTCCAAGGGCTTCTGTTGTTCAGTATCTTCTTTCCAAAGGTTTGATGAAGAAGAATGCCAGCTTAATTACACCATTTTATTGTTCTGATCAGGTGTTCCTGCAAAGATATGTGAATAATTTTGAGGAGGAAGCATATAGGATATTAAAGCTATGTCGGGGGGAGGATGCTAGCACGGATTGCCTGGATAAGCAGTAA 1146 0.3927 MFHYHRLRTLFFYSQTPKCYLLHPTHFLKPFSTSTTTSDSDQQSFTVSYLTNICGLSTQNALKASKRLRFNTPKKPDSVMAFFKTHGFSNDQIQSIIHTAPSLLTSKPIKTILPKFQFLSSKGASPSDIVDTVTKSPHFLCSSLQKQIIPSFELVRSFCPSDQKALTSITACSSSIKYGRMRLNVKFLLDLGVTSSGIYRLLTTRPSVICSANLKKYVEEIKELGFNPSKCSFCVALLAKTAVTKSQWDAKVDALKSWGFSEDEIFNAFKKQPNFMLRSTDKLNAVMRFWIKQLGWDRLLLLVAPDLFGFSIEKRLIPRASVVQYLLSKGLMKKNASLITPFYCSDQVFLQRYVNNFEEEAYRILKLCRGEDASTDCLDKQ* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2019 381 Gene3D Transcription termination factor 3, mitochondrial 163 366 IPR038538 -
Tpr4g2019 381 PANTHER CGI-12 PROTEIN-RELATED 17 371 IPR003690 GO:0003690|GO:0006355
Tpr4g2019 381 Pfam mTERF 215 350 IPR003690 GO:0003690|GO:0006355
Tpr4g2019 381 Pfam mTERF 81 227 IPR003690 GO:0003690|GO:0006355
Tpr4g2019 381 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 17 371 - -
Tpr4g2019 381 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Tpr4g2019 381 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Tpr4g2019 381 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Tpr4g2019 381 SMART mt_12 199 227 IPR003690 GO:0003690|GO:0006355
Tpr4g2019 381 SMART mt_12 166 194 IPR003690 GO:0003690|GO:0006355
Tpr4g2019 381 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2019 Tpr-Chr4 20849746 20851770 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr4g2019 mTERF 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2019 K15032 - gmx:102666739 353.984