Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2014 ATGGCACTGGATTCTACAATTGTTTCCTTGCTAAAATTATTAGTATTTTTTTATTGCCTCAGTTTGTTTTGCGTAAATGCAACATCCTACCGAGAAGTGCTACCAATGGGGCAGAAAATAAGAAATTCAGACACACTTGTTTCAAAAGGTGGGAACTACGAACTGGCATTTTTCACTAGAAACAGAGAGAACTCGACCAAGTACTACGTAGGTATACGGTTTAAAAAGGTACCAAATGACAGGATTGTTTGGGTTGCCAACAGAGATTACGCATTTGAAACATCGTCAGCATTTCTTACCATTCAGCCTGATGGTAACATTGTGATCAGAGATGGACGGATGACATATGGGGTGACCGATGTTTTAAATATCAACGAAAGTATTAGTACCTACGTAACCCTCTTGGACAAAGGAAACTTGGTACTGGTGAACACCTTTAACAAAGCAGTTTTATGGCAGAGTTTTAATTACCCCACGGATACCCTTTTGCCAGGAATGAACCTAGGACACGATATTAACAAAGGATACACTTGGTCATTGAGATCATGGAAGAGTACAGTTGACCCTTCTCCAGGACCATATACACTCCTATATAATTTTGGCTTATTGAGTCTATCGGTGAATAAAGGTTCTAAGGGTTTGCTGATTGATGGTAATTCAAATATTTCGATTCAGAATGTTTTTTATCGTGTACAACAAGGACCAAGAGATGGACCGAATGTTTTGAATCCCAATGTGACACAAAGTTACAACAACTACTTTACAATTGATAGCAATTATCGGTTGGTATTGGAAGTGTCTGGGGATCTTAAATACGAAGCCTTGTCCGAGGAATCTAACCGTTGGGTTTTTCAATCTTCATCCAAGTGTTCCATAGACAACTCGTGTGGAATTTTCTCCATTTGTAATAGGGAAGCTATTGACCCGTGTAAATGTCTCGATGGTTTTACACCGTTAGATGCTGATTCTTGGAACCAAGGTTACAGATCAGCTGGATGTGTCAGGATAAAAGCCTTGTCCTGCAGCAGCAATAACAGTAAAGATAGATTCTCGAATATTTCGGCGGTGGAATATCCTCCATCATATTATGTGTATCGGGAGGTGTATGCAGTACCACAATGTGAGTCTGATTGCTTCACTGACTGTTCTTGTGTTGCTTATGCTTATTATCTAAACGGTTCATGCATGTTCTGGAATGATCAAGTACCAACTCTAAGGAATACCTCATTTGATATTCAAGATGATAAAAATAAACTAAACTTTTTTCTCAGACTTGCTCAATCAGATTCTAATGTAAAGAATGCAATTGGAAGACAATATGGAAACAGGAAGAGGAATCTAATTCCAATTCTTATTTTGATCTCATTTCTACTATTTCTTTTACTACTTGGCATGTTTGTTTACAGAACTAGAAAGCAAAGGAGTAAAGGGGAGGATTTGCTAAACTTTGAAGTAGGCATGAGCATGAAAGTTAATAAAGACTCTAACATAGCTGACAAGGGTGTTAAAATTAAGAAGAAAGAAGTCAAGTTGCCATTATTCAGTTTGGTAAGCGTATCAACGGCAACTAATAACTTCTCTGATACAAATAAACTTGGCGAAGGTGGTTTTGGACCTGTTTATAAGGGTATATTATCGAATGGCGGTGAGGTTGCTGTAAAAAGGCTATCCCGAAGATCGGGTCAAGGATGGGAGGAGTTAAGAAATGAAGCATTGTTGATTGCAAAACTCCAACATAATAATCTTGTTAGACTTCTCGGCTGTTGCATTGAGCAAGATGAAAAGATGCTTATTTATGAATTCATGCCGAATAAAAGCTTGGATTGTTTTCTCTTCGATACAGCGAAAAGAAGGACGTTAGATTGGGAAACACGTGTTCGAATAATTGAAGGGATCGCCCAAGGACTCCTTTATCTTCATCAACATTCCAGGTTCCGGATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTAGACACCAACATGAATCCTAAAATATCAGATTTTGGAATGGCTAGGATATTTAGTGACAATGAACTTCAAGCAAATACAAATCGGATAGTTGGAACTTATGGCTACATGTCCCCTGAATATGCTATGGAAGGTCTTTTCTCAGTTAAATCTGATGTGTTTAGCTTTGGGGTCCTTCTGTTAGAGATTATAAGTGGCAAGAAGAATACTGGTTTTTATCAAACAAACTCTTTCAATCTTCTTGGATATGCTTGGGATCTATGGGCCAATGATTCCGGAATGGAGCTGATTGATTCAGAATTGAATGATATCTCTAACAAGCATTTAGTAGCAAGATATGTGAATATAGGACTTCTATGTGTTCAACAAAGTCCACAAGATAGGCCAACTATGTCTGATGTTGTATCAATGATTGGTAATGACACTACATCCCTTCCAAGTCCAAAGCCACCAGCATTTCAAAATGTGAGAGGTATTGTTGAAAATACAAGACTACCTAAAAGCATAGAAGAAAAATTTTCTGTGAATGTTATCACAGATTCAATAGTAGAAGCAAGATGA 2535 0.3775 MALDSTIVSLLKLLVFFYCLSLFCVNATSYREVLPMGQKIRNSDTLVSKGGNYELAFFTRNRENSTKYYVGIRFKKVPNDRIVWVANRDYAFETSSAFLTIQPDGNIVIRDGRMTYGVTDVLNINESISTYVTLLDKGNLVLVNTFNKAVLWQSFNYPTDTLLPGMNLGHDINKGYTWSLRSWKSTVDPSPGPYTLLYNFGLLSLSVNKGSKGLLIDGNSNISIQNVFYRVQQGPRDGPNVLNPNVTQSYNNYFTIDSNYRLVLEVSGDLKYEALSEESNRWVFQSSSKCSIDNSCGIFSICNREAIDPCKCLDGFTPLDADSWNQGYRSAGCVRIKALSCSSNNSKDRFSNISAVEYPPSYYVYREVYAVPQCESDCFTDCSCVAYAYYLNGSCMFWNDQVPTLRNTSFDIQDDKNKLNFFLRLAQSDSNVKNAIGRQYGNRKRNLIPILILISFLLFLLLLGMFVYRTRKQRSKGEDLLNFEVGMSMKVNKDSNIADKGVKIKKKEVKLPLFSLVSVSTATNNFSDTNKLGEGGFGPVYKGILSNGGEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIEQDEKMLIYEFMPNKSLDCFLFDTAKRRTLDWETRVRIIEGIAQGLLYLHQHSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFSDNELQANTNRIVGTYGYMSPEYAMEGLFSVKSDVFSFGVLLLEIISGKKNTGFYQTNSFNLLGYAWDLWANDSGMELIDSELNDISNKHLVARYVNIGLLCVQQSPQDRPTMSDVVSMIGNDTTSLPSPKPPAFQNVRGIVENTRLPKSIEEKFSVNVITDSIVEAR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2014 844 Gene3D Phosphorylase Kinase; domain 1 500 601 - -
Tpr4g2014 844 SUPERFAMILY Protein kinase-like (PK-like) 510 813 IPR011009 -
Tpr4g2014 844 Pfam D-mannose binding lectin 82 184 IPR001480 -
Tpr4g2014 844 ProSiteProfiles Bulb-type lectin domain profile. 31 155 IPR001480 -
Tpr4g2014 844 CDD PAN_AP_plant 339 426 - -
Tpr4g2014 844 Pfam Domain of unknown function (DUF3403) 798 844 IPR021820 GO:0004674
Tpr4g2014 844 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 841 - -
Tpr4g2014 844 ProSiteProfiles Protein kinase domain profile. 526 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2014 844 ProSiteProfiles PAN/Apple domain profile. 341 426 IPR003609 -
Tpr4g2014 844 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 28 841 - -
Tpr4g2014 844 PIRSF SRK 4 844 IPR024171 GO:0004674
Tpr4g2014 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Tpr4g2014 844 Pfam Protein tyrosine and serine/threonine kinase 529 795 IPR001245 GO:0004672|GO:0006468
Tpr4g2014 844 Pfam PAN-like domain 341 401 IPR003609 -
Tpr4g2014 844 Pfam S-locus glycoprotein domain 247 318 IPR000858 GO:0048544
Tpr4g2014 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 189 IPR036426 -
Tpr4g2014 844 SMART blect_4 37 158 IPR001480 -
Tpr4g2014 844 SMART serkin_6 526 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g2014 844 CDD B_lectin 40 158 IPR001480 -
Tpr4g2014 844 Gene3D - 26 156 IPR036426 -
Tpr4g2014 844 Gene3D Transferase(Phosphotransferase) domain 1 602 803 - -
Tpr4g2014 844 CDD STKc_IRAK 532 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2014 Tpr-Chr4 20792052 20795598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2014 448 811 Receptor kinase-like Gene Family AT4G23190 52.973 2.81e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr4g2014 PK_Tyr_Ser-Thr 8.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2014 - - mtr:MTR_8g061110 1021.54