Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2008 ATGCTTAGTCCTGAAGGAGAAATTAAAATAAGTTTTGGCTACAAATGCAATAGTGATAGAGGTATCCCTAGCGAGATCGCCGATGGCTACAAAAATCTTCCCATAGTCCGTAGAGCAAGTAGTTTCTCTTGTTTGTCAGGTGCAGCCATAAGTGCAAATGCTACACTAGCCAACACAAACATATGCAATGGTAAGATAGGTGTTGAAATCCTTCCAAGTTGGGATTCTCCTAATTCATTTCGTAGAGTGCCTTCTTCGCCAAGTCTTTCACGGTTCGAAAGACTATCGTCTTCGCTCCCAAATAGTCTCTCTTATCTAAGTTCCAGTCCTTCCACTACCAGTGATAGCCTTGAATACACGAGTGATCGTCCCAGTACCGACGGTTTTCTTATTGCTACAGAAGTTCAAGTTGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTCTTTTGTGCAATTTATGATGGATTTAATGGAAGAGATGCAGCTGATTTTCTGGCCGGTACCCTCTACGAAACCATCATATCTTACCTAGATAAGTTAATTTGGGAATTGGAGCCGGGTTCCATCACAACTTCCGACCATGTGGATTTGGGTGAATTACTTCGATATAAGTTGGATGATAGTCTTCATTGTCATGAGGATCATTCTCTGTCAAGATCATCACGGGAGTCTTTTTCGCGCGGGGTACTTGACAGCCTTGACCGTGCTCTTAGTCAGGCTGAGAATGACTTCTTGTACATGGTTGAGCAAGAAATGGGAGAACGTCCGGATTTAGTTTCTATTGGATCTTGTGTTTTGCTTTTGCTTCTTCATGGTAATGATTTGTATACACTGAATCTTGGCGACAGTAGAGCAGTACTAGCGACGTGCAGTAGCGGTGACAGAATGAATAAGAGTGAGAGACTTGAGGCTATACAGCTTACAGATAGTCACACTGTTGATAATGAAGCTGAAAGGACTAGACTCGTGGCTGATCATCCCGATGACCCTAAGGTCGTCATAGCAGGAAAAGTGAAAGGTAAGTTGAAGGTTACTCGTGCATTTGGAGTTGGCTACTTGAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTAGAGTTCACGATCTTACGAGCCCACCATATGTTTCCACTCAACCATCAATGAATGTGCATAAAATCTCAAATTCTGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGAAGAGGCAGTGAATCTTGTAGAGTCTTATATCTTAAGCAATCCTTTTGGTGATCCTGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCTGATTCCGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCAGCCGGGAGGAGAAGAAAGTACCATGATGATGTTACTGTAATGGTGATCAGGCTTGGAACGAATCAGAGAACTTCAAAAGCTTCAACTTGTATCTAA 1488 0.4214 MLSPEGEIKISFGYKCNSDRGIPSEIADGYKNLPIVRRASSFSCLSGAAISANATLANTNICNGKIGVEILPSWDSPNSFRRVPSSPSLSRFERLSSSLPNSLSYLSSSPSTTSDSLEYTSDRPSTDGFLIATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIISYLDKLIWELEPGSITTSDHVDLGELLRYKLDDSLHCHEDHSLSRSSRESFSRGVLDSLDRALSQAENDFLYMVEQEMGERPDLVSIGSCVLLLLLHGNDLYTLNLGDSRAVLATCSSGDRMNKSERLEAIQLTDSHTVDNEAERTRLVADHPDDPKVVIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVHDLTSPPYVSTQPSMNVHKISNSDQFVIVGSDGLFDFFSNEEAVNLVESYILSNPFGDPAKFLIEQLVARAADSAGFSMEELMNVPAGRRRKYHDDVTVMVIRLGTNQRTSKASTCI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2008 495 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 494 - -
Tpr4g2008 495 CDD PP2Cc 142 482 IPR001932 -
Tpr4g2008 495 SUPERFAMILY PP2C-like 141 483 IPR036457 -
Tpr4g2008 495 SMART PP2C_4 120 480 IPR001932 -
Tpr4g2008 495 ProSiteProfiles PPM-type phosphatase domain profile. 129 482 IPR001932 -
Tpr4g2008 495 PANTHER PROTEIN PHOSPHATASE 2C 2 494 IPR015655 GO:0004722|GO:0006470
Tpr4g2008 495 Pfam Protein phosphatase 2C 230 446 IPR001932 -
Tpr4g2008 495 Gene3D - 91 491 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2008 Tpr-Chr4 20721150 20725669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2008 4 495 PP2C-type Phosphatase Gene Family AT3G16560 62.913 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2008 - - gmx:100808304 763.837