Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g2004 | ATGAAAAATCCATTGGAATTTCCTTCCGTCAGCGGTTCCATAAGAATGCAACTTCGATCCTCATACAAGTGGGAATTGGTCGTTACTTCCTCAATCTCTAGGGGTAGAAATGTCCTGAATTTTCCCAGGGAATACACCAGAAATTGTTTAATGAACTCTGATAGGAAGATCTATCTTATTGATGTTGCATCTGGAAGAGTTTACAATTCAAAGATTTTTACTTCAGGTCAAAATAAAGAAAACAAATTTGTTTACTCTTGTTGGAAGCAATTTGTGACTGAGAACAAGTTGAAGTTCAGAGATAAGGTTATCTTCAATGCCACCACCGGTGATAATGTTATCGAAGTCCAGATCCTGCGTCGTCGCCGTCGTTCACGTTAG | 381 | 0.3885 | MKNPLEFPSVSGSIRMQLRSSYKWELVVTSSISRGRNVLNFPREYTRNCLMNSDRKIYLIDVASGRVYNSKIFTSGQNKENKFVYSCWKQFVTENKLKFRDKVIFNATTGDNVIEVQILRRRRRSR* | 127 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g2004 | 126 | Gene3D | - | 14 | 123 | IPR015300 | - | |
Tpr4g2004 | 126 | SMART | B3_2 | 23 | 122 | IPR003340 | GO:0003677 | |
Tpr4g2004 | 126 | Pfam | B3 DNA binding domain | 28 | 121 | IPR003340 | GO:0003677 | |
Tpr4g2004 | 126 | ProSiteProfiles | B3 DNA-binding domain profile. | 24 | 122 | IPR003340 | GO:0003677 | |
Tpr4g2004 | 126 | SUPERFAMILY | DNA-binding pseudobarrel domain | 24 | 121 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g2004 | Tpr-Chr4 | 20702709 | 20703363 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Tpr4g2004 | B3 | 3.3e-09 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g2004 | - | K09792 | mtr:MTR_6g087720 | 52.7582 |