Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1999 ATGCTGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTACATGCCGATGGTTAATGAAATTTTTTCGAGTGGTGGTACAACTAACTTTCCCGAATTTTCAACACAAATAACTATTGCTAATGAAGATTCAACTCCTATGAGCAAGAAAAACCATCAACCATCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATCAAATTTGGAACAAGCAGTGTTGTCGGGAAAAACCAGAAAGGTGAAACATATTGGGGTCAAATTGCTGACTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGAGTTGCATGCCGAAACCGTTTTAATTATATGAACAAAATACTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTCTCCAAGGAAGTGGTTGGTCCGAGAATGATGTTTTGACAATGTTTCAGGATTAA 450 0.3978 MLRNPSQTPPFNGYMPMVNEIFSSGGTTNFPEFSTQITIANEDSTPMSKKNHQPSWNTEQNLVLISGWIKFGTSSVVGKNQKGETYWGQIADYCNEHCSFDPPRDGVACRNRFNYMNKILGKWIGAYDGAKRLQGSGWSENDVLTMFQD* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1999 149 PANTHER - 1 145 - -
Tpr4g1999 149 PANTHER PUTATIVE-RELATED 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1999 Tpr-Chr4 20673803 20674252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1999 22 144 Glutathione S-transferase Gene Family AT5G41240 30.469 4.54e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1999 - - mtr:MTR_3g067785 226.868