Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1993 ATGAAAAATGATTTGATTGATAGAATAACACACTATCCATTTGATCTTCTACGCTACGCTACAGTGACGATCATGGAGAACCCTCAGTATCCAAACAACAACCCTCCTTCTCCTCCTTCACCCTATCAACACCAACGCGACGTTTCCATTCCCAAACCACAATCGCATCATTCCGATAATAATGATCCAACCACCGCTGAGTTACGTGCTCTCGATTGTAATCTCGCTTCTCTCTGCGAACATGTTCAAATTGAAGGTTTCAATTCCGGTTCATTTTCCGATATCGTTGTTAATGCAATGGGTTCTACTTATCATCTTCATCGTCTCATCCTCTCCCGCAGTTCATATTTCAGGAACATGCTTCATGGTCCATGGAAAGAAGCCAGTGCTGCTATTGTGACCCTGCTAATTGATGATAGCAATGTTAATGATGAAGCTATTGCAATTGCTTTGGCATATCTATATGGAAACCACCCTAAACTTAATGATAATAATGCATTTCGTGTTCTTGCTGCCGCTTCCTTTCTCGACCTTCAGGATTTATGTGCTATATGTACAGATTTCATCATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGATTACGGCATTCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGCTACCTTTGTCAAAGTGGGGGCATGGAATTGAGAGAGGTGCTTCCTAAACTTTCATCTCATACGTTACATGCATTACTAACCTCTAATGATCTGTGGATATCCTGTGAAGAGAAGCGGTTTGAATTGGCTTTTCTCACATTCCTGGCAAAAAGTGCTCACTGCAAGAATGAACATCCTGCACATGGAATTCCTGATTCTGAGTCTGCAACTGGCATTCATTCTGATTCTGATAACACCAAGGGTAAAGGTATCATTGATAGCTGCACAAACGAGAGGTTGGAAACTGACTTGGGGAAAATGAGTCTTAAAAGTGATCTAAAGGACCCTAGCATGCCTAATCTTTTAGTTGAGCTTGCAAACTCAGCATTAGACTTCAACAATGGCGTTTCTGATTCTAATCAACGGGTTCAACTTGCTTCATATGCCAGTTCACCAAACTTGAATCCAAGATATCCTTGTGACATGGAAGGGACTTCATTGGGTAATTCATTGTCTGATACAGATGGGGCGAGAACATCTTGTTATGTTGAGGTGCCTCTTGGTGCTGGAACAATTACTGGAATGGGTATTGAAGGGCCATCTGAGGGAGGATCTTGCTACCATTCGGATAACAACAATAGGTTGGTCAGGGATCAATCAAGACATTGTTTTTCATCGAGTTCTTCTAATGGGCCCACATCCAGTGACTGGGGAAGATATGGAACACCTTTGCTTTCGTGGGGTGGCCATGTTGGCAGAAGACAGGTCAAAGCTCATCCCAGAGGAAACTATGTAGATGAAGACGATGTATTTCTTAATATATTTGAAGGGGGCTCACTTTTATATTGCAATATGTCATTTGATGCACTTTTAAATGTCAGAAAGCAGCTTGAAGAAATAGGATTCCCGTGCAAAGCTGTAAATGATGGTCTGTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAGATTGCTGCTGATACATGCAGAGTTTGTTCACTTATGACTATGTCTTGTACTTGCCAAAAGCAGTTTGCATTTTTACACGGATCTACTACCACTGGATCTTACATGCAAGAACATAATCATAACAATATGCCTGGGGGTGGAGGAAATATATATGTTGCTGAATCTTCGACAGGAGAAAGAAATGGCTCTTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCCGGGATTGGCCGTGGAACAACATTTGTTCCTGCAGCGGCTTCTCCTCCTACACGATTTGTCTTTTCTCGTGTACCATTTGGCGTTGGCAACAGAAACTACCCTCAATCTGCCGCCAATGATGATTCAGAGGCCCGTGCTGATCACAATGGAGACCTGTCTGGAGATGGATTGACAGCTTTAGTTGGGCTAAGCCAGGGAGGGAATTATGGAACAAATGTAAATACAGAACTAACACAAAGGGGACATGAAATGGGCATGCAAAGTACTGCTGGTGGTGCAAGTTCTGGTGGCATTCCCGTACAGATGTTAGAGACACCAGAACACACCGTTGGTATAGAATGGGAGAATGACAACAGTTCTTCTATATCATTGGATTTGAAAACACCTCTGAGCCATTTCCCCCCTTTTCGCTTTGGTGTAAGTTTTGAGGAAGTGCACAGGCTTGGTGATGGCCAGGTCAAGCATTCGCCAGAAGTTTTCTATGCTGGTTCTTTATGGAAGGTCAGTATTCAGGCTTTTAATGATGAAGACCCCCAGGGACGGCGTACCCTTGGGTTGTTTCTTCACCGTCGGAAGGCAGAGATAACTGATGTACACAGGAAGGTACATATGTATGTTGACTCGCGTGAAAAGGTCACTGCACGGTATCAGTTGACTTGCCCATCCAAGAGGGAAATGTTGGTGTTTGGAAGCTTTAAACAAACGGGCACTCTTCTACCCAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTATTTGATGAACTTGCTGATCTTCTCCAAAATGGTGCCCTAAGGGTTATTGCTGTAGTGCAGCTTGTTTGA 2682 0.4359 MKNDLIDRITHYPFDLLRYATVTIMENPQYPNNNPPSPPSPYQHQRDVSIPKPQSHHSDNNDPTTAELRALDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAAIVTLLIDDSNVNDEAIAIALAYLYGNHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELREVLPKLSSHTLHALLTSNDLWISCEEKRFELAFLTFLAKSAHCKNEHPAHGIPDSESATGIHSDSDNTKGKGIIDSCTNERLETDLGKMSLKSDLKDPSMPNLLVELANSALDFNNGVSDSNQRVQLASYASSPNLNPRYPCDMEGTSLGNSLSDTDGARTSCYVEVPLGAGTITGMGIEGPSEGGSCYHSDNNNRLVRDQSRHCFSSSSSNGPTSSDWGRYGTPLLSWGGHVGRRQVKAHPRGNYVDEDDVFLNIFEGGSLLYCNMSFDALLNVRKQLEEIGFPCKAVNDGLWLQMLLSQRVQEIAADTCRVCSLMTMSCTCQKQFAFLHGSTTTGSYMQEHNHNNMPGGGGNIYVAESSTGERNGSFRPVRVHVRGAIDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGVGNRNYPQSAANDDSEARADHNGDLSGDGLTALVGLSQGGNYGTNVNTELTQRGHEMGMQSTAGGASSGGIPVQMLETPEHTVGIEWENDNSSSISLDLKTPLSHFPPFRFGVSFEEVHRLGDGQVKHSPEVFYAGSLWKVSIQAFNDEDPQGRRTLGLFLHRRKAEITDVHRKVHMYVDSREKVTARYQLTCPSKREMLVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1993 893 Gene3D Potassium Channel Kv1.1; Chain A 65 226 IPR011333 -
Tpr4g1993 893 SMART BTB_4 93 193 IPR000210 GO:0005515
Tpr4g1993 893 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 40 893 - -
Tpr4g1993 893 MobiDBLite consensus disorder prediction 43 63 - -
Tpr4g1993 893 Pfam BTB/POZ domain 87 191 IPR000210 GO:0005515
Tpr4g1993 893 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 40 893 - -
Tpr4g1993 893 SUPERFAMILY POZ domain 87 191 IPR011333 -
Tpr4g1993 893 MobiDBLite consensus disorder prediction 34 63 - -
Tpr4g1993 893 ProSiteProfiles BTB domain profile. 93 163 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr4g1993 BTB 5.4e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1993 - - gmx:100806711 1429.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1993 4 20632360 20638029 Tpr4g1993 4 20632360 20638029 ECH