Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1979 ATGGCTGGAAAAGGAGAGGCCCCTGCTGTTGGAATCGACCTCGGCACCACCTACTCCTGCATTGGAGTGTGGCAGCACGACCGTGTCAAAATCATCCCGAATGAACAAGGCAACCGGACCACCCCCTCTTATGTCGCTTTCACAGATTCTGAGCGCTTGATCGGCGGGGCAGCCAAGAGCCAGGTCACCAGGAACCCCACCAACACTATCTTCGATGTGAAGCGTCTGATTGGAAGGAGATTCTCTGATGCTTCCGTTCAAAGTGACATGAAGCTATGGCCATTCAAGGTCATTTCTGGTCCTGCTGACAAGCCCATGATTGTTGTTAACTACAAGAATGAGGAGAAGCAGTTTGCTGCTGAGGAGATTTCCTCCATGGTCCTATGGAAGATGCGTAAGATATCTGAGGCTTATCTTGGTTCCAACGTGAAGAATGTCGTTCTTACCGTCCCAGCATACTTCAATAACTCCCAGCGCCAGGCCACGAAGGATGCTGGACTCATTGCGGGCCTTAATGTCGTGCGTATCATCAATGAACCCACTGCTGCTGCCCTTGCCTATGGCCTTGACAAGAAAGCCACCGATGATAGTAATGAAGTAACAATGTTTGTCACAAGAAAGGGGGGTTTGAATTGTGACCCTTTAAAAATTTAA 654 0.4939 MAGKGEAPAVGIDLGTTYSCIGVWQHDRVKIIPNEQGNRTTPSYVAFTDSERLIGGAAKSQVTRNPTNTIFDVKRLIGRRFSDASVQSDMKLWPFKVISGPADKPMIVVNYKNEEKQFAAEEISSMVLWKMRKISEAYLGSNVKNVVLTVPAYFNNSQRQATKDAGLIAGLNVVRIINEPTAAALAYGLDKKATDDSNEVTMFVTRKGGLNCDPLKI* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1979 217 PANTHER HEAT SHOCK PROTEIN 70KDA 1 204 IPR013126 GO:0005524|GO:0140662
Tpr4g1979 217 Gene3D - 3 211 - -
Tpr4g1979 217 Pfam Hsp70 protein 9 198 IPR013126 GO:0005524|GO:0140662
Tpr4g1979 217 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr4g1979 217 SUPERFAMILY Actin-like ATPase domain 9 191 IPR043129 -
Tpr4g1979 217 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr4g1979 217 PRINTS 70kDa heat shock protein signature 36 48 - -
Tpr4g1979 217 PRINTS 70kDa heat shock protein signature 58 66 - -
Tpr4g1979 217 PRINTS 70kDa heat shock protein signature 146 166 - -
Tpr4g1979 217 PANTHER 70 KDA HEAT SHOCK PROTEIN 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1979 Tpr-Chr4 20535770 20536981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1979 1 194 Calmodulin-binding Proteins AT1G56410 84.536 3.74e-119 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1979 K03283 - sspl:121766042 343.584