Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1970 ATGAATTCCAATTATGGAAAACCCAATCCTCAAAAATCATCCTCTGTTTCTCTCGACAACTTCAATTTCGATCTTGATCTCGGAATCGGATCCAATCGATCCAAATCCCTAAAAGATCAGAAAAACCCCAATCCTTCTTATTCCAATTCCTATTCAACTCCTTCATATTCATCAGCGCAACCCAAAAAAACCACTTGGACCCATCAACCCACTCAAACTCCGGCCGGATTACCCGGTGCACCACCGTCGATGGTTGGTGACATCTTCGGAAAAAGTTGGGGATCTACTCAACCGTCTGGTCCTAGCATTGGGATTGTTAATAAAAACCCTAATTTATTTGGGGATTTGGTAACCTCTGCTTTGGGTCAAGGTTCTTCTTCTTCTTCAAATGTTCCTCTGAAAAATGCAACTCCAAAACCTAAAAATTCTTCTTTTTCAATGTCAAATGTGGCTGATTCTTTGCCTAAACCTGCTAATACAACAACACAGAGTGGTTCTACTTGGGGATCATCTTCTGGGAGTTTTAATTTGAATGCTAATAAAACTCCCAATCTTGGTGGTCCTTCGATTCGAAGTGGCGTTGGTGTTGCTGCATCTGGTACTGGAATTGGTTCTAGTAACAAAGATCCTTTTAGTTCATTGGCTGGTTTTGGATCTAATGGATCTAAGCAAAATTCTACTCTTAATTCAGCTGCTAAACCTCAGAAAATTGATTTAGAAGATGATGGTTTTGGAGATTTTCAAAATGCTTCAAAACCAAGCTCTAATGCATTTCCATCAAGTGGTGGTAGTTCTGGAATTAATTTTGATTTTACTGGTTCGTCCGCTTCGAATAAGACACCGGTTCAAGCTTCTTCGGGTGGTGGTGATCCAATGGATATGTTTTTCACATCTTCAACTGCGTCATCTGGAGGTGGTGGTGGCGGTGGTGCAGCGGCAGCATCATCTGAAATTGATGATTGGGGTACTGAGTTTGGAAGTGGAAACCATGATGTGGGTGGAACAACTACTGAGCTTGATGGGCTTCCACCTCCTCCTGCTGGGATATCAGGTTCTGCTGCTAAAGGCAAAGGGATGGATAATTACAAACAGGGGCAGTTTGCTGATGCTATTAAATGGCTTTCATGGGCTCTCATCATTTTAGAGAAAGCTGGTGATGGTGCTGGCACGGCGGAGGTTTTGTCATGCAGAGCTTCCTGTTATAAAGAAGTTGGAGAGTATAAAAAAGCAGTGGCGGATTGTACTAAGGTTATTGGAAACGATGAAAAAAATGTATCTGTCCTCGTTCAGCGTGCTCTCTTGTACGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAAAACTGTGCTGAAGATTGATCCTACTAATAGGGTTGCTAGAAGTACTGTTCACCGGTTGGCTAAGATGGCTGAATAG 1422 0.4226 MNSNYGKPNPQKSSSVSLDNFNFDLDLGIGSNRSKSLKDQKNPNPSYSNSYSTPSYSSAQPKKTTWTHQPTQTPAGLPGAPPSMVGDIFGKSWGSTQPSGPSIGIVNKNPNLFGDLVTSALGQGSSSSSNVPLKNATPKPKNSSFSMSNVADSLPKPANTTTQSGSTWGSSSGSFNLNANKTPNLGGPSIRSGVGVAASGTGIGSSNKDPFSSLAGFGSNGSKQNSTLNSAAKPQKIDLEDDGFGDFQNASKPSSNAFPSSGGSSGINFDFTGSSASNKTPVQASSGGGDPMDMFFTSSTASSGGGGGGGAAAASSEIDDWGTEFGSGNHDVGGTTTELDGLPPPPAGISGSAAKGKGMDNYKQGQFADAIKWLSWALIILEKAGDGAGTAEVLSCRASCYKEVGEYKKAVADCTKVIGNDEKNVSVLVQRALLYESMEKYKLGAEDLKTVLKIDPTNRVARSTVHRLAKMAE* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1970 473 PANTHER OS03G0340700 PROTEIN 1 473 - -
Tpr4g1970 473 MobiDBLite consensus disorder prediction 29 74 - -
Tpr4g1970 473 MobiDBLite consensus disorder prediction 29 81 - -
Tpr4g1970 473 SMART tpr_5 425 458 IPR019734 GO:0005515
Tpr4g1970 473 SMART tpr_5 391 424 IPR019734 GO:0005515
Tpr4g1970 473 SMART tpr_5 351 384 IPR019734 GO:0005515
Tpr4g1970 473 ProSiteProfiles TPR repeat profile. 425 458 IPR019734 GO:0005515
Tpr4g1970 473 Pfam Tetratricopeptide repeat 426 458 IPR019734 GO:0005515
Tpr4g1970 473 SUPERFAMILY TPR-like 353 463 IPR011990 GO:0005515
Tpr4g1970 473 Gene3D Tetratricopeptide repeat domain 351 472 IPR011990 GO:0005515
Tpr4g1970 473 MobiDBLite consensus disorder prediction 124 147 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1970 366 473 Calmodulin-binding Proteins AT3G25230 31.250 9.91e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1970 - - vun:114178472 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1970 4 20471320 20474638 Tpr4g1970 4 20471320 20474638 ECH