Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1955 ATGATATCGCGATTACCGAGTCTCATCGTCGTTTTAGCAACAATCATACTTTCAACGACGTCGTTTACCGATGCACAAACCGATGGACTATCCTGCAACGGCATATTCATCTCTTACTCTACCAGCACCGCACTACGTCTTCCTCCGAACGTCACCGACCCAAAGAAACAACCATACCGATTCGATTCGACGTTGACTGTAGTCAACAACGGTCTCGATGAGCTCAAGTCATGGAAAGTCTTCATTGGATTTCAACACAACGAGTTTTTAGTTTCCGCTTCCAATGCGGTAATCGCCGACGGTACTACCCTCCCCGCCGCCGTTGGAAATGGAACTGTTTTGGCTGGATTTCCTATGACTGATTTGAAGACTGCTGTTGAAACTGCTGGTGATTGGTCTCAGATGCGGACTCAGATCAAGCTTCTTGGTACTGTTTTTGGGGTGGCGCCGCCGGCAATTCCGTTGCCGTCTTCCATCAAACTCACTAATGATGGGTTCATTTGTGGGAAAGCCACCGGTGAAGTATTAGAGGAAGATGAGGCTAAAGTGTGTTGCACAAGAGATCCAAAGTTCAAAGGAAGCATCACTACAGATGAAAAGTTTCTGCCTCGTCAGAATGGTGATCTTACTATTATGTATGATGTGATCAGATCTTATGATTCAAATTACTGGGCAGAGGTTGCTATTACTAACCATAATACTCTTGGAAGGCTTGATAATTGGAGGTTGAGTTGGGATTGGATGTATGGTGAGTTTATATTTTCAATGAAAGGTGCTTATCCGTCTGTTGTGGATTCTTCTGGTTGTATCTTTGGTAAGCAAGGTACATTTTACAAGGAACTTGATTTTGCTAATGTGTTGAATTGTGAGAGGAGACCTACCATTATTGATCTTCCTCCTACTAAGTTCAATGACACTGATATTGGGAAAATTCCTTCTTGTTGCCGGAACGGTACTATATTGCCACCATCTATGGATCCAAGTAAATCTGTTTCAAGATTCCAAATGCAGGTATACAAAATGCCGCCTGTGCTTAACCGGTCCGAGCTTTCACCGCCTCAAAACTGGAAGATCAGTGGATCACTTAACCCCGACTACAAATGCGGTCCTCCGGTTCGTGTTAGTCCTACTGAGACTCCAGATTCTAGTGGGTTGCCATTAAACAAAACTGTAATGGCAAGTTGGCAGGTTGTGTGTAACATTACAACAGCCAAGGGAACATCAAATAAATGCTGTGTCTCATTTTCAGCTTATTACAATGAATCAGTTATTCCATGCAAAACATGTGCATGTGGATGCCCCAGGAATGTGCCAAGAACATGTAGTACTACTGCACCTGCTATGTGGCTTCCCTCACAGGCACTCCTTGTTCCTTTTGAGAACCGAACTGCTCAGGCTGTTGCGTGGGCTAATCTGAAACATCTACCACTGCCACTACCAATGCCCTGCAGTGATAATTGTGGTGTGACCATCAATTGGCATTTACTTACAGATTATAATAAAGGATGGAGTGCAAGGGTCACACTTTTCAATTGGGGTGAGACTAATTTTGCAGACTGGTTTGCTGCTGTGCAAATGGACAAAGCTGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGCAAGTTCCTTAGAGATAGACGGCGTGAATAATACGATAATAATGCAAGGTTTGGAGGGATTGAACTACCTTGTTGGAGAAACAAATGGAGCTGACCCTCGGAGAGATCCTAGAGTGCCTGGCAAACAACAGTCAGTAATCTCATTCACAAAGAAAACTACTCCTGGAATCAGTGTTGTTCGTGGTGACGGGTTCCCCACTAAAGTTTTCTTCAATGGGGAAGAATGCTCTCTTCCTTCTGTACTCCCAACTAGCAGTGCTTCCAGGAAGGGATTTCCCTATGCTACTTTGATGCTTCTACCATTGTTGCTATTCGTCTTCATGTTGTAA 1950 0.4379 MISRLPSLIVVLATIILSTTSFTDAQTDGLSCNGIFISYSTSTALRLPPNVTDPKKQPYRFDSTLTVVNNGLDELKSWKVFIGFQHNEFLVSASNAVIADGTTLPAAVGNGTVLAGFPMTDLKTAVETAGDWSQMRTQIKLLGTVFGVAPPAIPLPSSIKLTNDGFICGKATGEVLEEDEAKVCCTRDPKFKGSITTDEKFLPRQNGDLTIMYDVIRSYDSNYWAEVAITNHNTLGRLDNWRLSWDWMYGEFIFSMKGAYPSVVDSSGCIFGKQGTFYKELDFANVLNCERRPTIIDLPPTKFNDTDIGKIPSCCRNGTILPPSMDPSKSVSRFQMQVYKMPPVLNRSELSPPQNWKISGSLNPDYKCGPPVRVSPTETPDSSGLPLNKTVMASWQVVCNITTAKGTSNKCCVSFSAYYNESVIPCKTCACGCPRNVPRTCSTTAPAMWLPSQALLVPFENRTAQAVAWANLKHLPLPLPMPCSDNCGVTINWHLLTDYNKGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNASSLEIDGVNNTIIMQGLEGLNYLVGETNGADPRRDPRVPGKQQSVISFTKKTTPGISVVRGDGFPTKVFFNGEECSLPSVLPTSSASRKGFPYATLMLLPLLLFVFML* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1955 649 PANTHER COBRA-LIKE PROTEIN 7 9 647 - -
Tpr4g1955 649 Pfam COBRA-like protein 223 402 IPR006918 GO:0010215|GO:0031225
Tpr4g1955 649 PANTHER COBRA-LIKE PROTEIN 7 9 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1955 Tpr-Chr4 20345548 20348824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1955 32 630 COBRA Gene Family AT4G16120 65.000 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1955 - - gmx:100814396 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1955 4 20345548 20348824 Tpr4g1955 4 20345548 20348824 ECH
Tpr4g1955 4 20345548 20348824 Tpr5g2853 5 51735746 51738157 PCT