Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1951 ATGATCAATCATGGTGTGCTCCCTTGCCTTTTGAGCTTATTGACACACATTCATAAAAAAAGCATCAAGAAAGAAGTTTGTTGGACTATATCAAACATTACAGCTGGAACTCAGGAACAAATACAGGCTGTTATTGAAGCTGGTCTTATTGCTCCACTTGTTAGTCTTCTTCAAAATGCAGAGTTTGAGATTAAAAAAGAAGCTGCTTGGGCAATATCAAATGCCACATCTGGTGGAATTAATGAGCAGATCAAGTATTTGGTGGGTCAGGGTTGCATAAAACCACTATGTGATCTGCTTGTTTGCCCCGATCCAAGAATCGTCACTATCTGTTTAGAGAGCCTAGAGAATATTCTGAATGTTGGAGAAGCAGAGAAGAGGTTGGGTAACTCTGTAGATTCCAACTTGTATGCCGAGATGATAGAGGATTCAGAGGGATTGGAGAAGATTGAAAACCTGCAGAATCATGACAACACTGGAATATATGAGATGGCTGTTAAACTTCTTGAAACATTCTGGTTGGAAGAAGATGAGAATGAGATGATACTACCTTCTGGCGATGATCAATCTGGTTTCATGGCTTCAGTCCCATCTGGTGGATTTAACTTCAACTGA 615 0.4 MINHGVLPCLLSLLTHIHKKSIKKEVCWTISNITAGTQEQIQAVIEAGLIAPLVSLLQNAEFEIKKEAAWAISNATSGGINEQIKYLVGQGCIKPLCDLLVCPDPRIVTICLESLENILNVGEAEKRLGNSVDSNLYAEMIEDSEGLEKIENLQNHDNTGIYEMAVKLLETFWLEEDENEMILPSGDDQSGFMASVPSGGFNFN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1951 204 Gene3D - 1 174 IPR011989 -
Tpr4g1951 204 SMART arm_5 80 120 IPR000225 GO:0005515
Tpr4g1951 204 SMART arm_5 1 35 IPR000225 GO:0005515
Tpr4g1951 204 SMART arm_5 37 77 IPR000225 GO:0005515
Tpr4g1951 204 PANTHER IMPORTIN SUBUNIT ALPHA 1 181 - -
Tpr4g1951 204 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 48 76 IPR000225 GO:0005515
Tpr4g1951 204 SUPERFAMILY ARM repeat 2 178 IPR016024 -
Tpr4g1951 204 PANTHER IMPORTIN ALPHA 1 181 - -
Tpr4g1951 204 Pfam Atypical Arm repeat 135 181 IPR032413 -
Tpr4g1951 204 Pfam Armadillo/beta-catenin-like repeat 1 35 IPR000225 GO:0005515
Tpr4g1951 204 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Tpr4g1951 204 Pfam Armadillo/beta-catenin-like repeat 81 118 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1951 Tpr-Chr4 20303459 20304992 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1951 K15042 - vvi:100248248 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1951 4 20303459 20304992 Tpr4g1951 4 20303459 20304992 ECH
Tpr4g1951 4 20303459 20304992 Tpr1g1392 1 12728140 12733065 ECH
Tpr4g1951 4 20303459 20304992 Tpr6g0330 6 2674099 2679612 ECH
Tpr4g1951 4 20303459 20304992 Tpr5g2850 5 51699703 51703893 PCT