Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1928 ATGGGATGCATACTAGGTCTGAGAGTTTCTCCTACTCACAGGAGAAAGGGGGTTGGACTAAAACTTATAACCTCAATTGAAGAATGGATGCTAAGAAATGGTGCTGACTATGCATTCCTAGCCACAGAAAAGAACAACAATGCCTCTAAAAACCTATTCACAAACAAATGCAACTATGTCAATCTCACATCACTTACCATATTTCTCCATCCAACAACTTTCCCTACAAACCACATTTCCAACAAGGACATAAAAATTGACAAAATAAACATAGATCAAGCAATATCCTTGTACACAAGAATCTTTAAGACCAAAGATTTGTATCCATTAGACATGGATGTTATTCTCAAAGAAAAACTAAGCCTAGGTACTTGGGTTAGTTATTACAAAAATGAAGGCTTCAAACTCAATAATGAAGACATTACAACAAACTCATCATGGATCATTTTTAGTTTATGGAATACTTGTGAAGCTAATGATAATAAGGTTCATGATAAGACAAAATTATTTCAACCACTTAGGTTTCTTCATGCTACATTAAATCATGCAAAGGACAAAATATGTCCATGTTTGAGAATGTTAGGGAATGAGTCATTGATGTGTGAAAGTTTAGGGTTTCTTTTTCTTTATGGACTTCATGGAGAAGGAGAGAATCTTGGAGGATTAATGGAATCAATATGGAGTTTTACATCAAAATTAGGAGAGAAATTAAAGGATTGTAGATTGGTTATCACTGAATTAGGGTTTGGTGATCCACTTGTAAACCATGTTCCTCAAATGGAATCTATGTCATGTATTGATGATATGTGGTACACAAAAAGGCTTGCAAGGGACAGTGATGATGATGTTGATGATGAATTGGTGCAGCAGCAGGTGATGAAGAGACAACTTGGAAATGTGTTTGTGGATCCTAGAGATTTTTAG 924 0.3506 MGCILGLRVSPTHRRKGVGLKLITSIEEWMLRNGADYAFLATEKNNNASKNLFTNKCNYVNLTSLTIFLHPTTFPTNHISNKDIKIDKINIDQAISLYTRIFKTKDLYPLDMDVILKEKLSLGTWVSYYKNEGFKLNNEDITTNSSWIIFSLWNTCEANDNKVHDKTKLFQPLRFLHATLNHAKDKICPCLRMLGNESLMCESLGFLFLYGLHGEGENLGGLMESIWSFTSKLGEKLKDCRLVITELGFGDPLVNHVPQMESMSCIDDMWYTKRLARDSDDDVDDELVQQQVMKRQLGNVFVDPRDF* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1928 307 Pfam Acetyltransferase (GNAT) family 4 59 IPR000182 GO:0016407
Tpr4g1928 307 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 59 IPR016181 -
Tpr4g1928 307 CDD NAT_SF 2 40 - -
Tpr4g1928 307 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 307 - -
Tpr4g1928 307 Gene3D - 1 151 - -
Tpr4g1928 307 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 1 307 - -
Tpr4g1928 307 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 121 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1928 Tpr-Chr4 20133341 20134873 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tpr4g1928 Acetyltransf_1 8.7e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1928 - - gmx:100814448 405.601