Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1923 ATGATGGGAAGTGAAGAAAGAGAGAAAGTAGTGAAGAAGAAGATCCAAGAACTAGAAGAAGGACATGCTTTCATGAAACAAGAAATGTCAAAGCTTAAGTTTAATGATGGTAAAGAACAACAACATCGTCAAAGGTCTCAGTCTGTGTCTCCTCAACGTTCTAGATTAGGTTCATGGAACAAAGGTTCTTGTTCTTTCAAACACTCATCACCTCTCAGAAAGGAAACTCATGCTCATACTCATACACTCATCAATTTCACTGAAAAACATTATCTCAATATTTTGCACTCTTTGGGCCATTCTGTTCATATCTTGGATCTTAACTCTCGTATCATTTATTGGAACCGTAGTGCTGAAAATCTGTATGGTTATGCAGAAGAGGAAGTTTTGGGACAGGATGGGATTGATTTGCTTGTGGACTCTAGGGATTGGGGGTTAGCTCATGATACAGTGAATTGTGTCATGAAGGGAGAAAGATGGAGTGGTCAATTCCTAGTCAAGAATAAGAAAGGAGATAGCTTTTTAGCTGTAACAACCAATACTCCTTTTTATGATGATGGAAGCTTAGTTGGGATTATCTCTGTGTCGAGTGATTCCCGGCCGTTTCTTGAAATGAGGGCTCCATTTTTTGGTGTAAAGAATGCTGAATCGGATAATGGTTCTATGCGTCGTAGCAGTAGTGTTGCAAATAAGCTTGGCTTTGATTCTCAGCAGCCACTTCAATCTGCTATAGCATCTAAATTTTCGAATTTGGCGTCGAAGATGAGTAACAAAGTTAAGTCGAGAATTTGGACCGGAGAAAATAATGTGGACCGTGAAGGTGTGAATGGAGAAAGTTATCATTCTGAACTTGGTTTCTCAGAACACCGAGAAGATGCTAATTCTAGTGGAGATACCACACCTAGAGGTGATTTGCCACAGTCCCCTCCTGGTGTATTTTATCGTGTTGAAGAAAAGTTTGAAGGAAAAACTTTGAGAGATTCTGGTGATGAGAGTGAAGGAAAACCTGTTCACAAAATTTTACCTACTAAGGCTGAAGCATGGATTCAAAAGAAAACATTATCGTGGCCATGGAGAACAAATGATCGAGAAGAATCAGAGGCAAGAAATGTTCGTGCTGCTGATCTGTGGATGCAGAATGATCAAGAAAATGAATCAGTTAATCAGAAGAATCTTTCTTCTGGCTTGAAGCATGAAAGCCAGGCCGGTGAAAGTAATCGCCATACTAACAATGAGGGTTCATTATCCCGTTCTTCCTCTTATAATGTTATTCTTAACAACACGAGTAGTGCTAGCAGTTGTGGGAGTGCTGGCAGTGGTGGTGTAAATAGTAAAGTGGATGTAGACTCTGATTGTTTGGATTATGAAATTTTGTGGGAGGATTTGACGATTCGAGAACAAATTGGACAGGGTTGTTGTGGAACTGTGTACCATGCGCTGTGGTATGGATCAGATGTTGCTGTCAAGGTTTTCTCAAAGCAAGAGTATTCGGATGATTTGATACAGTCCTTCAGGCAAGAGGTATCTGTCATGAAAAGACTTCGACACCCAAATATTCTCCTCTTTATGGGAGCAGTGACTTCTCCTCAACGTCTCTGCATTGTGACGGAGTTTCTCCCACGAGGAAGCTTGTGTCGCTTGTTACATAGAAACACGTCCAAACTTGATTGGAGACGGCGAGTTCATATGGCTTTGGATATTGCACGAGGCGTAAATTATCTTCATCATTATAACCCGCCTATTATTCATAGAGATTTGAAGTCTTCAAATCTTCTAGTTGATAAGAACTGGACTGTTAAGGTTGGTGATTTTGGTCTTTCACGTCTTAAGCACGAAACATATCTCACAACTAAGACAGGAAGGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAACGAACCGTCAGATGAAAAGTCTGATGTATACAGCTTCGGGGTGATATTATGGGAACTTGCGACTGAAAAGATTCCTTGGGATAATCTCAACGCAATGCAGGTAATTGGAGCTGTTGGGTTCATGAATCAGCGTCCGGAAATTCCAAAAGATGTTGATCCAGGGTGGGCTTCTTTAATTGAGATCTGCTGGCACAGTGATCCAACTTGCCGACCAACTTTCCCGGAACTGCTCGAAAGGCTTAAAGAGTTGCAAAAACAGTATGTCATTCAGTTCCAGGCGGCCCGATCGGCTGGTGGGGAAAGCACCCAAAGAAAGGAGTCCTAG 2226 0.4169 MMGSEEREKVVKKKIQELEEGHAFMKQEMSKLKFNDGKEQQHRQRSQSVSPQRSRLGSWNKGSCSFKHSSPLRKETHAHTHTLINFTEKHYLNILHSLGHSVHILDLNSRIIYWNRSAENLYGYAEEEVLGQDGIDLLVDSRDWGLAHDTVNCVMKGERWSGQFLVKNKKGDSFLAVTTNTPFYDDGSLVGIISVSSDSRPFLEMRAPFFGVKNAESDNGSMRRSSSVANKLGFDSQQPLQSAIASKFSNLASKMSNKVKSRIWTGENNVDREGVNGESYHSELGFSEHREDANSSGDTTPRGDLPQSPPGVFYRVEEKFEGKTLRDSGDESEGKPVHKILPTKAEAWIQKKTLSWPWRTNDREESEARNVRAADLWMQNDQENESVNQKNLSSGLKHESQAGESNRHTNNEGSLSRSSSYNVILNNTSSASSCGSAGSGGVNSKVDVDSDCLDYEILWEDLTIREQIGQGCCGTVYHALWYGSDVAVKVFSKQEYSDDLIQSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTSKLDWRRRVHMALDIARGVNYLHHYNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNAMQVIGAVGFMNQRPEIPKDVDPGWASLIEICWHSDPTCRPTFPELLERLKELQKQYVIQFQAARSAGGESTQRKES* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1923 741 SUPERFAMILY PYP-like sensor domain (PAS domain) 87 198 IPR035965 -
Tpr4g1923 741 SUPERFAMILY Protein kinase-like (PK-like) 452 714 IPR011009 -
Tpr4g1923 741 MobiDBLite consensus disorder prediction 29 43 - -
Tpr4g1923 741 Gene3D PAS domain 100 201 - -
Tpr4g1923 741 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 30 737 - -
Tpr4g1923 741 ProSiteProfiles PAS repeat profile. 87 158 IPR000014 -
Tpr4g1923 741 CDD STKc_MAP3K-like 468 714 - -
Tpr4g1923 741 MobiDBLite consensus disorder prediction 29 61 - -
Tpr4g1923 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Tpr4g1923 741 SMART serkin_6 462 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1923 741 MobiDBLite consensus disorder prediction 376 418 - -
Tpr4g1923 741 ProSiteProfiles Protein kinase domain profile. 462 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g1923 741 MobiDBLite consensus disorder prediction 377 418 - -
Tpr4g1923 741 CDD PAS 102 198 IPR000014 -
Tpr4g1923 741 PRINTS Tyrosine kinase catalytic domain signature 536 549 IPR001245 GO:0004672|GO:0006468
Tpr4g1923 741 PRINTS Tyrosine kinase catalytic domain signature 575 593 IPR001245 GO:0004672|GO:0006468
Tpr4g1923 741 PRINTS Tyrosine kinase catalytic domain signature 622 632 IPR001245 GO:0004672|GO:0006468
Tpr4g1923 741 PRINTS Tyrosine kinase catalytic domain signature 641 663 IPR001245 GO:0004672|GO:0006468
Tpr4g1923 741 PRINTS Tyrosine kinase catalytic domain signature 685 707 IPR001245 GO:0004672|GO:0006468
Tpr4g1923 741 TIGRFAM sensory_box: PAS domain S-box protein 88 198 IPR000014 -
Tpr4g1923 741 Gene3D Phosphorylase Kinase; domain 1 455 539 - -
Tpr4g1923 741 SMART pas_2 89 156 IPR000014 -
Tpr4g1923 741 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 737 - -
Tpr4g1923 741 Pfam Protein tyrosine and serine/threonine kinase 462 714 IPR001245 GO:0004672|GO:0006468
Tpr4g1923 741 Pfam PAS fold 90 195 IPR013767 GO:0006355
Tpr4g1923 741 Coils Coil 15 35 - -
Tpr4g1923 741 MobiDBLite consensus disorder prediction 44 61 - -
Tpr4g1923 741 Gene3D Transferase(Phosphotransferase) domain 1 541 728 - -
Tpr4g1923 741 MobiDBLite consensus disorder prediction 288 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1923 Tpr-Chr4 20088937 20094835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1923 13 740 MAP Kinase Kinase Kinase AT3G06620 56.567 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr4g1923 PK_Tyr_Ser-Thr 1.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1923 - - gmx:100785569 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1923 4 20088937 20094835 Tpr4g1923 4 20088937 20094835 ECH