Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1913 ATGACATCACCATCTACAACAACACCACCAAACATAGTAACAAACACAGACTCAAAGAGAAAGAGAACAAAAAACAGAGCATACAAGAATCTTCAAGATCAGCTTCAAACCACCCACCCAAAATGGAAATCTCAAACACAACAACAAATCTACTCTACCAAACTCCGACAAGCCTTAACAAGAGTCAACACATCAACAACACAACGCCGTGGAAAAGCCGTTCGAGAAGCCGCCGATAAAGCACTAGCCATGACAGCTAAAGGAAGAACTCGATGGAGCAGAGCCATTTTAACAACCCGGCTCAAACTCAAGTTTAGGAAGAAGAAGAAACAGAAACAGAGACTAACGGCGTCACCGTTAAATCGGTCAAAGAAATCAAGGATCAATGTTTTACGGTTGAAGGGGAAGGTGGTTCCTAGTGTGCAGAGGAAAGTAAAGTTCCTTGGAGGATTGGTTCCTGGTTGTAAAAAAGAACCGTTACCGGTGATTCTGGAAGAAGCTATTGATTATATACCTGCGCTTGAGATGCAGGTTCGAGCTATGAGTGCTCTTTTTAATCTTCTTTCAGCTTCTACTTCCGGTGCCGGTGCCGGTGTTGGCTCCGGTTCCAGTTGA 615 0.439 MTSPSTTTPPNIVTNTDSKRKRTKNRAYKNLQDQLQTTHPKWKSQTQQQIYSTKLRQALTRVNTSTTQRRGKAVREAADKALAMTAKGRTRWSRAILTTRLKLKFRKKKKQKQRLTASPLNRSKKSRINVLRLKGKVVPSVQRKVKFLGGLVPGCKKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSASTSGAGAGVGSGSS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1913 204 MobiDBLite consensus disorder prediction 1 16 - -
Tpr4g1913 204 CDD bHLH_AtIBH1_like 130 184 IPR044549 GO:0006355
Tpr4g1913 204 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 200 IPR044660 GO:0006355
Tpr4g1913 204 MobiDBLite consensus disorder prediction 1 22 - -
Tpr4g1913 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 191 IPR036638 GO:0046983
Tpr4g1913 204 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 8 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1913 Tpr-Chr4 20030935 20032028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1913 39 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 52.601 5.12e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1913 - - gmx:100803765 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1913 4 20030935 20032028 Tpr4g1913 4 20030935 20032028 ECH