Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1909 ATGGCTATGCAGTTAGTAATATTATTGTGTCTAGTAACTTCAGCATTTGCAGCCAAAGTGAATGAAGCCTATGGTGGTGACATTACTGGAAGTCCATTAGGGATTGGCATATACCAATACAGTTGCCCTGAAGCAGAGAATATAATATTCTCTTGGGTGGAACAAGCTGTCTCTAGTGACCCAAGAATGGCAGCTTCATTGCTTAGGCTTCATTTTCATGATTGCTTTGTCAATGGTTGTGATGCTTCGGTTTTACTGGATGACACAAAAAACTTTGTTGGTGAAAAAACGGCTGCTCCAAACGTGAATTCACTTAGAGGATTTGAAGTAATCAATGAAATAAAATCTGAATTAGAACTTGTTTGTCCTCAAACTGTTTCTTGTGCTGACATACTAGCAGCTGCTGCTCGAGATTCGGTTCTTCTGTCAGGAGGACCAACTTGGGAGGTGCAAATGGGAAGAAAAGATAGTATAACAGCTAGCAAGGAAGGGGCAAATAATAATATTCCAGGCCCAAATTCAACTGTTGATATGCTTGTGGCCAAGTTTGAAAACGTTGGCCTTACACTTCAAGACATGGTTGCCCTCTCAGGTGCTCACACAATTGGAAAAGCTCGCTGCTCAACATTTAGATCTCGCTTACAAAGTAACGGCATCTCAGACGGTCCATATGTTAACGCTGAATTTGTTGCATCATTGCAACAGTTGTGCTCAGGACAAGATAATAGAAACCGAATTGCACATCTGGACCTGGCCACGCCCGCTACATTCGATAACCAGTACTATATTAATCTTCTTTCTGGGGAAGGATTGCTTCCATCAGACCAGACTCTGGTGAATGGGAATGATCAGACAAGACAGATTGTCGAAACCTACGTAGAGAACCCATTTGCTTTCTTTCAGGACTTCAAGAATTCAATGATAAAAATGGGAAGTTTGGGATCAGTTACGCAGAGTAATGGACAGATTCGTAGGGACTGCCGAACTATTAACTAA 996 0.4167 MAMQLVILLCLVTSAFAAKVNEAYGGDITGSPLGIGIYQYSCPEAENIIFSWVEQAVSSDPRMAASLLRLHFHDCFVNGCDASVLLDDTKNFVGEKTAAPNVNSLRGFEVINEIKSELELVCPQTVSCADILAAAARDSVLLSGGPTWEVQMGRKDSITASKEGANNNIPGPNSTVDMLVAKFENVGLTLQDMVALSGAHTIGKARCSTFRSRLQSNGISDGPYVNAEFVASLQQLCSGQDNRNRIAHLDLATPATFDNQYYINLLSGEGLLPSDQTLVNGNDQTRQIVETYVENPFAFFQDFKNSMIKMGSLGSVTQSNGQIRRDCRTIN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1909 331 Pfam Peroxidase 53 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 CDD secretory_peroxidase 33 328 IPR033905 GO:0004601|GO:0042744
Tpr4g1909 331 Gene3D - 38 331 - -
Tpr4g1909 331 Gene3D Peroxidase, domain 2 170 311 - -
Tpr4g1909 331 PANTHER PEROXIDASE 72-RELATED 9 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 SUPERFAMILY Heme-dependent peroxidases 33 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 ProSiteProfiles Plant heme peroxidase family profile. 32 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1909 331 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Tpr4g1909 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Tpr4g1909 331 PANTHER PEROXIDASE 40 9 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1909 Tpr-Chr4 19987909 19989437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1909 25 331 Peroxidase AT4G16270 63.091 1.27e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1909 K00430 - gmx:100787637 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1909 4 19987909 19989437 Tpr4g1909 4 19987909 19989437 ECH