Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1884 ATGGAGATTATTTCAATTTTAGTTTACATCTTCCTTTTTCTCTCAACTATCATCTCTTATCCATTCTTAAAGAAGCACACTCAACACAAACTCAAAACCAAGCCTAAGCTTCCCCCAGGTTCAATGGGTTGGCCTTATATAGGAGAAACTCTTCAACTCTACTCTCAACACCCTAACATCTTCTTTGCTTCCAAACAGAGAAGATATGGAGAAATATTTAAAACACATATACTAGGATGTCCTTGTGTGATGTTAGCAAGTCCTGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTCAAGCCTACATATCCTAAAAGCAAAGAGAAACTTATTGGTTCTTCTGCATTGTTCTTTCACCAAGGACATTACCATACTCGCATTAGGAAACTCGTTCAAAACTCGCTTTCTCCTGAATCAATCAAGAAATTGATCCCATATATAGAAACCCAAGTCATTTCCTCCTTGGAATCTTGGGTTTCTTCTGGTCAAGTCATTAATGCTTTCCAAGAAATGAAAAAGTTCTCTTTCAATATCGGCATCCTCTCTGTCTTTGGTAACTTGGAAGGAAATTATAGAGAGAAGCTTAAGGAGAATTACAGCATTGTAGAGAAAGGATACAATTCTTTTCCAACTAGGATACCGGGCACTGCATACTCTAAAGCACTTTTGGCGAGGCAGAGAATTCAAGAAATTATAAGTGAAATCATTTGCAAGAAAAGGGAGCAGAGATTGATTGAGAAGAATCTATTGGGCCACTTGCTAAACTACAAGAATGAAAAAGGTGAAATGTTAAGTGATGAGGAAATAGCTGATAATGTAATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTTCTTACTTGGATTCTCAAGTATCTTCATGATGACCCGAAACTTCTTGAAGCAATTAAAATGGAGCAAATGTCACTATACCAAGCTAATGAAGGAGGGAAGATGCCATTGACTTGGAATCAAACCAGAAATATGCCTATTACACACAGGGTAATATTGGAAAGCCTAAGGATGGCAAGCATAATCTCATTTACTTTTAGGGAAGCTGCGGATGATGTAGTATACAAGGGATATTTAATACCAAAAGGTTGGAAAGTAATGCCTCTATTTAGAAACATCCACCACAATCCAGAATTCTACCCTGCTCCTCACAGTTTTGACCCATCAAGGTTTGAGGTTTCCCCGAAGCCCAATACATTTATGCCATTTGGCAATGGAGTGCACTCTTGTCCAGGAAATGAGCTAGCCAAATTGAACATGTTGATTTTAATCCACCATCTAGTAACCAAATTTAGGTGGGAGGTAGTAGGATATAATCAAACCGGAGTTGAATATAGCCCATTTCCAATACCGATGCATGGTCTACCAACAAGATTTTTGAGAGATTAA 1416 0.3806 MEIISILVYIFLFLSTIISYPFLKKHTQHKLKTKPKLPPGSMGWPYIGETLQLYSQHPNIFFASKQRRYGEIFKTHILGCPCVMLASPEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGHYHTRIRKLVQNSLSPESIKKLIPYIETQVISSLESWVSSGQVINAFQEMKKFSFNIGILSVFGNLEGNYREKLKENYSIVEKGYNSFPTRIPGTAYSKALLARQRIQEIISEIICKKREQRLIEKNLLGHLLNYKNEKGEMLSDEEIADNVIGVLFAAQDTTASVLTWILKYLHDDPKLLEAIKMEQMSLYQANEGGKMPLTWNQTRNMPITHRVILESLRMASIISFTFREAADDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHSFDPSRFEVSPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVGYNQTGVEYSPFPIPMHGLPTRFLRD* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1884 471 Pfam Cytochrome P450 38 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PANTHER CYTOCHROME P450 26 8 468 - -
Tpr4g1884 471 SUPERFAMILY Cytochrome P450 33 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 8 468 - -
Tpr4g1884 471 Gene3D Cytochrome P450 26 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g1884 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1884 Tpr-Chr4 19835725 19840973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1884 3 470 Cytochrome P450 AT3G19270 67.735 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1884 K09843 - gmx:100806350 802.357