Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1864 ATGGAGTTCAAGTCTACTTGGAGTGAAGCATATTTTAATATTTTATATTCACAAAAGACTAAACAAAACAAAATGATGATAAGGTGTGTCTATGTGGCTACAAAACCAAGCTACAACTTGATGATTCTCAATTCTCATTCTTTCTCCTTCCCATTAACAAAACGCCCTCTTTTTCCTTCATTGAAAAAACCCTTAATCATACACTGCACACAGCATCAACAACAACAACAACCGTTATCCAACATGGATTCATCCTCCTCCACCATAGACGATGAAATAGCCGTTGATCTAACTCCAGTCCTTAAACTTTACAAAAACGGTCGTGTTCAGAGGTTAGCAGGAACTGAGGTTGTTCCACCATCTCTTGATCCAACAACAAACGTTGAATCAAAAGATGTTATAATCTCCAAAGAACATGACATATCAGCAAGACTTTTCATTCCAAAAACAACATACCCACCAACCCAAAAGCTCCCTCTCCTTGTGTATTTCCACGGTGGTGCTTTCTGTATCGAAACCCCTTTCTCACCAAACTACCATAACTATCTTAACTCTGTTACTTCACTTGCTAACGTTATTGGTGTCTCTGTTCATTATAGAAGAGCACCAGAACACCCTATTCCCATCGCTCATGAAGATTCATGGCTTGCACTCAAATGGGTCGCTTCACATGTTAATGGAAATGGCTCTGATGAATGGTTGAATCAATATGCAGATTTTGGGAAAGTGTTCTTAGGAGGCGACAGTGCTGGTGCCAATATTGCACATTATTTGGGTATTCGGGTCGGGAAAGAAAAATTAGATGGTGTGAATCTTGAAGGGATTTTTTATGTTCATCCTTATTTTTGGGGTGTGGATCCAATTGGGTCAGAATCAAATCAAGCTGAATATTTAGAAAAGGTTCATAATTTATGGCGTTTTGCATGTCCAACCACGAGTGGATCCGATGATCCGTTAATTAACCCGGCTAAGGATCCGAATTTGGGGAGCTTGGGTTGTAAGAAAGTGCTTGTTTGTGTTGCTGAGCAAGATTTGTTGAAAGATAGGGGTTGGTATTATAAAGAGTTGCTTGAAAAAACTGGTTGGGGTGGTGTTGTTGAAGTGATTGAAACAGAGGATGAAAATCATGTTTTTCATATGTTTAAACCAACAAGTGAAAAAGCTAAGATTTTGCTTAATCAAGTTGTTTCCTTCATAAAAAATGCTTGA 1209 0.3854 MEFKSTWSEAYFNILYSQKTKQNKMMIRCVYVATKPSYNLMILNSHSFSFPLTKRPLFPSLKKPLIIHCTQHQQQQQPLSNMDSSSSTIDDEIAVDLTPVLKLYKNGRVQRLAGTEVVPPSLDPTTNVESKDVIISKEHDISARLFIPKTTYPPTQKLPLLVYFHGGAFCIETPFSPNYHNYLNSVTSLANVIGVSVHYRRAPEHPIPIAHEDSWLALKWVASHVNGNGSDEWLNQYADFGKVFLGGDSAGANIAHYLGIRVGKEKLDGVNLEGIFYVHPYFWGVDPIGSESNQAEYLEKVHNLWRFACPTTSGSDDPLINPAKDPNLGSLGCKKVLVCVAEQDLLKDRGWYYKELLEKTGWGGVVEVIETEDENHVFHMFKPTSEKAKILLNQVVSFIKNA* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1864 402 Pfam alpha/beta hydrolase fold 161 380 IPR013094 GO:0016787
Tpr4g1864 402 Gene3D alpha/beta hydrolase 71 401 IPR029058 -
Tpr4g1864 402 PANTHER ARYLACETAMIDE DEACETYLASE 89 400 - -
Tpr4g1864 402 PANTHER CXE CARBOXYLESTERASE 89 400 - -
Tpr4g1864 402 SUPERFAMILY alpha/beta-Hydrolases 100 401 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1864 Tpr-Chr4 19514046 19515519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1864 89 402 Carbohydrate Esterase AT3G48690 49.845 9.04e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1864 - - cam:101495689 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1864 4 19514046 19515519 Tpr4g1864 4 19514046 19515519 ECH
Tpr2g5730 2 66520977 66522683 Tpr4g1864 4 19514046 19515519 PCT