Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1860 ATGGATCAAAATTCCAACGAAATTCTCCGTGAGTTCCCTAACCTCTTCCGTCAATACAAAGACGGCCGCATCGAACGCTTTATCGGCACCGAAATCACCCCAACGGGCAACGATCAATTAACCGGCGTGCAATCCAAAGACATTACCATCAACGCCGATACCGGCGTTGGAGCTCGTCTCTATCTCCCACCAAACGCCACTCCTTCTCAAAAAATCCCTCTCTTAATCTACATTCACGGTGGCGCTTTCTGTATCTGCAGTCCTTTCAGTCTAGGCTACAACCGTCACGCCAACAACATCGCCGCAGCAGCAAACGTCGTAGTTTTCTCCGTTCATTATAGGTTAGCACCGGAACACCCTCTTCCTATTGCTTATGATGATACATGGGAAGCAATTCAATGGATATCAGAAAGTTCTGATCCATGGCTCAAAGATCATGCTGATTACAACGTTGTTTTCTTCGCCGGAGATAGTGCCGGAGCCAACCTCGCACACAACATGGCGATGCGAGGTGCTTCCGAAGGTTTTGGAGCATTAAAGCTTCAAGGAATAGTGTTGATCCATCCTTTCTTTGGAAATGATGAGAAAGATGAGCTTATTGAGTATTTGTATCCGAGTTATGGTGGATTTAATGACCCGAAAATACACGCGGCGAAGGATCCTAATCTTTCGAGTCTTGGAGTTGGGAGAGTGCTTGTGTTTGTGGCGGAGAAGGATTTTTTGAGAGAAAGAGGGAGGAGTTATTATGAGGCGGTGAAGAAGAGTGGTTGGAATGGGGAGGCGGAGATGGTGGAGACGGAAGGTGAAGGTCATGTGTTTCATTTGTATGAGCCTGCTAAGGAGAAATCTGTGAATCTTGTTAAACAGTTTGCATCTTACATGACGCAGATTGAGAAAGACGTTCGATCCTCTTCGTCATTGTGA 924 0.4632 MDQNSNEILREFPNLFRQYKDGRIERFIGTEITPTGNDQLTGVQSKDITINADTGVGARLYLPPNATPSQKIPLLIYIHGGAFCICSPFSLGYNRHANNIAAAANVVVFSVHYRLAPEHPLPIAYDDTWEAIQWISESSDPWLKDHADYNVVFFAGDSAGANLAHNMAMRGASEGFGALKLQGIVLIHPFFGNDEKDELIEYLYPSYGGFNDPKIHAAKDPNLSSLGVGRVLVFVAEKDFLRERGRSYYEAVKKSGWNGEAEMVETEGEGHVFHLYEPAKEKSVNLVKQFASYMTQIEKDVRSSSSL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1860 307 Gene3D alpha/beta hydrolase 15 300 IPR029058 -
Tpr4g1860 307 PANTHER CARBOXYLESTERASE 2-RELATED 4 297 - -
Tpr4g1860 307 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 152 164 IPR033140 -
Tpr4g1860 307 PANTHER ARYLACETAMIDE DEACETYLASE 4 297 - -
Tpr4g1860 307 Pfam alpha/beta hydrolase fold 75 274 IPR013094 GO:0016787
Tpr4g1860 307 SUPERFAMILY alpha/beta-Hydrolases 27 296 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1860 Tpr-Chr4 19488088 19489748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1860 6 294 Carbohydrate Esterase AT3G48700 39.938 6.36e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1860 - - mtr:MTR_4g086540 527.324