Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1845 ATGTGTAAAATCATTTTAACCATACTCTTCCTCCTATTTTTCTCATCAACTATTTCTTCCTCCTCCTACAACCACCAACACCACCGCCGTATCCTCCACCAACCACTCTTTCCATCTATCTCACTTCCACCAACACAATCACCATCTTCATCACCACAAACCCAACCAAAACCACAAAAACACCAACCCAAGCTTCCATTTTCTTCCATGTCTTCTTCTTCACCACCACAACCATTTTCTCCACCTTTCTTTCCAACTTACCAATCACCACCACAACCTCCTTCTCCACCTTTCCTCGCCACTTTCCCAGCTAACATCTCTTCCTTACTCCTTCCAACACCTCACACTAAAACCCATAACCACCGCTCCGCCGCCGCTCTTCTCATTTCCCTCTCACTTTTCTCCATCCTCCTCCTCACGTTATCTGCTTTCTTTGCCTACCACCGTCGTCATCATAACCACCACAAAACTTCCTCCACCACTGCTAACGACGACACTGCTTCAAGATCAGATAGTCTCCGTTTATTCCCGCCGAACACCGCCACTTCAGACTCCGTCGACAGTAAACCAAACGAAAAACCATCAACTGGGTCGGAGATATTTCACCTCGGAACCATATCAAGCTCAGAAAACACAAGAGTTACTACTGCAGAGTCAAGCTGTAACGGCAATGTCGGTTTCTCGCCGCCGTACCGGCATCTTACAGACTCACCGGAGCTTCATCCTTTACCTCCTCTACCACGTCACAATGTCAGAACATGGAAGAATGAACCAAAGAAAGAAGAAAATATAGCTAGAGAAGATGAAGAGTTTTATTCACCAAAAGTTTCTCCTTCTTCTTCACCAGTTGTTGCTGCTGCTACTACTGCAACAAGCTCTCATTTTGATAAATTTGGCAGCAAAAGCTTCAATTCAAGAACAGCTTCTTACCCTCTTTCTCGTTCTCCTTCTCTCAATCTTAGCCCTATTGAAAGTATCAATTCGTTTCCACCTCAGAACTCTGCATCTCCATGTTTTTCTTCTCCTATGCAGAGGGAAGATTCTGATTTGAATTTGGATGGTAAGAATGTTGAAGTGAGCAAACTTCCTCCTCCTGCTCCGCCGCCTCTGCCGCCGAGGTTTTGGGAGACTCCGGTAGTGGCTTCCCAAGATGTTAATGTTGAGAATGAGGAAAGTTCAAAGCCAAAGTTGAAGGCTTTACATTGGGATAAAGTTAAGGCCAGCTCAGATAGGGCCATGGTTTGGGATCACTTGAGACCAAGTTCATTTCAGTTGAATGAAGACATGATTGAGTCACTCTTTATGGTAAATAATTCCAATTCCAATGGAAATTCTGCTTTGGCTCCTAAAGATAATGCTCGGAGCCAAATAATCCATGCTGCTTCCATGCCGCCAGAAAATAGGGTACTTGATCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTCGAGCGCTGAATGTAACTATTGATGAAGTTTGTGAATCCCTATGGGAAGGCAATTGTGATACACTGGGAACAGAACTTCTAGAAAGTTTATTAAAGATGGCCCCAACTGAAGAGGAAGAATCTAAGCTGAGGGAGTTTAAAGACGAGTCACCCTTCAAACTAGGCCCGGCTGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTTCATTCAAAAGAATGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTGAAGAAGTCCTTTGATACTCTGGAGGTGGCTTGTGAGGAATTAAAGAATAGCAGAATGTTTATGAAGATACTAGAGGCAGTTCTTAGAACAGGAAATCGAATGAATGTTGGCACCGATCGTGGTGACGCACAAGCATTCAAACTGGACACACTTTTGAAGTTAGTTGATATTAAAGGAACTGACAGAAAGACTACTCTTTTACATTTCGTTGTACAAGAAATTGTCAGAACCGAGGGTTCTCTTGTATCTGGTGCTGACCATCACAATGTTGACTCCTTCAATAACCATCAGTGTACTCTTCAAGATGAGGTTGACTCGAGGAAGCTTGGACTGCAAGTTGTATCAGGTTTGAGTGGAGAACTCACCAATGTTAAAAAGGTAGCTGTTATGGATTCAGACACGCTAAGTAGCGATGTTGCTAAACTTGCCAAAGGAATTGAAAAGGTTGTGTTAGTTGTAAAATTGAATGAAGAGTCGCCTTTGAAAGAAACCAACCAAAAATTTTCTGAGGCAATGAAAAGTTTCTTAGAGAGAGCTCAGGAAGAGATTTTAAGAATCCAGGCGCAAGAGAAAAGTGCCATCTCTTCAGTGAAGGAGGTAACTGAGTACTTCCACGGTAATTCGGCAAAGGAAGAAGCTCATCCGTTTAGGATATTTATGGTTGTGAGGGATTTCCTTTCGATACTAGATGGCGTATGCAAGCAAGTTGGGAAAGCAAATGAGAGGACTTTAGTTGGTTCGCGGCTAGATGTAATGCCTTCAATCACTACACTGCCACCAATTTTCCCCGAGTTTAATGGTAAGCAGCCATCTGGTGATTCCTCAGAATCTGATTAG 2553 0.4281 MCKIILTILFLLFFSSTISSSSYNHQHHRRILHQPLFPSISLPPTQSPSSSPQTQPKPQKHQPKLPFSSMSSSSPPQPFSPPFFPTYQSPPQPPSPPFLATFPANISSLLLPTPHTKTHNHRSAAALLISLSLFSILLLTLSAFFAYHRRHHNHHKTSSTTANDDTASRSDSLRLFPPNTATSDSVDSKPNEKPSTGSEIFHLGTISSSENTRVTTAESSCNGNVGFSPPYRHLTDSPELHPLPPLPRHNVRTWKNEPKKEENIAREDEEFYSPKVSPSSSPVVAAATTATSSHFDKFGSKSFNSRTASYPLSRSPSLNLSPIESINSFPPQNSASPCFSSPMQREDSDLNLDGKNVEVSKLPPPAPPPLPPRFWETPVVASQDVNVENEESSKPKLKALHWDKVKASSDRAMVWDHLRPSSFQLNEDMIESLFMVNNSNSNGNSALAPKDNARSQIIHAASMPPENRVLDPKKSQNIAILLRALNVTIDEVCESLWEGNCDTLGTELLESLLKMAPTEEEESKLREFKDESPFKLGPAEKFLKVMLDIPFSFKRMDAMLYIANFDSELEYLKKSFDTLEVACEELKNSRMFMKILEAVLRTGNRMNVGTDRGDAQAFKLDTLLKLVDIKGTDRKTTLLHFVVQEIVRTEGSLVSGADHHNVDSFNNHQCTLQDEVDSRKLGLQVVSGLSGELTNVKKVAVMDSDTLSSDVAKLAKGIEKVVLVVKLNEESPLKETNQKFSEAMKSFLERAQEEILRIQAQEKSAISSVKEVTEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKQVGKANERTLVGSRLDVMPSITTLPPIFPEFNGKQPSGDSSESD* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1845 850 MobiDBLite consensus disorder prediction 43 72 - -
Tpr4g1845 850 MobiDBLite consensus disorder prediction 153 221 - -
Tpr4g1845 850 SUPERFAMILY Formin homology 2 domain (FH2 domain) 363 814 - -
Tpr4g1845 850 PANTHER FORMIN-RELATED 12 849 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tpr4g1845 850 MobiDBLite consensus disorder prediction 236 273 - -
Tpr4g1845 850 ProSiteProfiles Formin homology-2 (FH2) domain profile. 387 827 IPR015425 -
Tpr4g1845 850 MobiDBLite consensus disorder prediction 252 273 - -
Tpr4g1845 850 MobiDBLite consensus disorder prediction 160 221 - -
Tpr4g1845 850 Pfam Formin Homology 2 Domain 389 801 IPR015425 -
Tpr4g1845 850 Gene3D Formin, FH2 domain 395 818 IPR042201 -
Tpr4g1845 850 SMART it6_source 387 816 IPR015425 -
Tpr4g1845 850 PANTHER FORMIN-LIKE PROTEIN 2 12 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1845 Tpr-Chr4 19333192 19337538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1845 376 819 FH2 protein (formin) Gene Family AT3G25500 65.702 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1845 - - gmx:100786203 907.131