Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1842 ATGGCCATGCAATCACCTTCCTCTTCCTCGTCATTTTCCTATGGTTTCACTTACCAAGTCTTTCTCAGTTTTAGGGGCAAAGACACTCGCGATGGTTTTACCGGCAATCTCTACAAGGCTCTTATTGACAAGGGAATCCACACCTTCATTGATGACAATGAACTTCAAAGAGGAGATGAAATCACACCATCACTCGTCAAGGCCATTGAGGAATCTAGGATTTTTATTCCTGTGTTTTCTATCAACTATGCCTCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCACTGCTACAAGACAAAGGGTCGCTTCGTTTTGCCTGTTTTCTATGGAGTGGATCCTACTCACGTACGGCATCATAATGGAAGTTATGGTGAACAGCTCACTAAGCACGAAGAGAGGTTCCAAAATAACAAAGAAAACATGGAGCGATTGCATCAATGGAAGATGGCTCTTAACCAAGCTGCTAATTTGTCTGGCTACCATTTTAGTTCTGGATATGAATACAAATTTATCGAAGAGATAGTGAAATACATCTCCAACAAGATCAATCGTGTTTCTTTACATGTTGCCGATTACCCTGTTGGATTACATTCTCGAGTACAACAAGTGAAATCACTTCTTGATAAGGGCTCTAATGATGAGGTCCACATGGTAGGAATTTATGGAGCAGGAGGCTTGGGTAAATCAACACTTGCAAGAGCAATTTACAATTTTGTCGGCGATCAATTTGAAGATATATGTTTTATTCATAACGTGAGAGAGAATTCAACTCAAAATAACTTGAAACATCTCCAGGAGGAGCTCCTTTTAAAAACAGTTGGATTGGACATTAAGTTAGGAGATGTTAGTGAGGGAATTCCAATCATAAGGGAAAGACTACATAGAAAGAAGATTCTCTTGATTCTCGATGACGTTGACAAACTGAAGCAATTGCAGGTTTTGGCTGGAGGATTTGATTGGTTCGGTGCTGGCAGTACAGTCATCATTACCACTCGAGACAAACACTTACTAAACAGTCACGAGATAAAAGACATGTATGCAGTAGAAGGGTTGTATGGGACAGAAGCTCTTGAATTGTTGAGGTGGATGGCTTTTAAAAATAACAAAGTTCCTTCAAATTATGAAGCAATTTTAAACCGTGCAGTTACCTATGCTTCTGGCCTTCCATTAGCTATAGAAATAGTAGGTTCCAATTTGTTTCGAAAGAGCATAGAAGAATGGAAGTATACATTAGATGGCTATGAAAAGATTCCCAATAAAGAGATCCAAAAGATACTTAAAGTAAGCTTTGACGCTTTGGAGGAAGAGGAGCAAAGTGTCTTTCTGGATATTGCTTGTTGCTTCAATGGATGTAGAATGACAGAGGTTGAAGAGATACTTCGTGCTCATTACGGAGGCTCCATGACACATAGAATTCAAGTGTTGTCTGAAAAATCTCTCATTAAGATTGGCTATTTTGAGCAGAGTTGTTTTTGCAGTGTGACAGTGCATGACTTGATAAAGGACATGGGTAAAGAAATTGTCCGACAAGAATCACCCAAAGCGCCTGAAAAACGCAGTAGGTTGTGGCTCCGAGAAGACATAATTCAAGTTTTAGAAAAGAATACGGAAAATAGTGATATTGAAATCATATCTCTGAATTGCGGCTCAACTGAAGCAACAATGGATTGGGACGGAAAGGCTTTCGAGAAGATGAAAAGTCTCGTGACACTTATCATTAAAAGTGATAATTTTTCCGAAGGCTCCATACGCTTTCCATGTAACTTGAGAGTATTAAAATGGCAAAAATATCATTCACAGTGTATACCATATAGCTTTTTCAACAAGAAGTTCGAGAATATAAAAGTTTTGAAATTTGACAATTGTGAATATTTAAGAGAAATATCAGATGTGTCTTGTCTACCAAATTTAGAGAATTTTTCATTTGAAAATTGTGAGAATTTAGTTACAATTCACAATTCGATTGGATTTCTGAATAAACTTGAATTCTTAAATGTCAGCGGTTGCATTAAGCTCAAGAGTTTTCCACCCTTGAATTTGGTTTCTCTTAAGAAACTGATACTTTCCCATTGTAACAGTCTCCAAAGTTTTCCAGAAATATTAAGCAAGATTGAAAATATAAAAGATATAGATATTCGGGAAACTTCCATTGAAGACTTTCCAGTTTCATTTCAAAATTTCACTGAACTTATTTCGATATCTATATCTATAGGGGGATGTGGAATGTTGAGGTTACCAAGTTTCATTTTCAAGATGCCAAAATTTTCAAGTATTTGGGTTCAAAAAATTTATCATAACTTTATGTCAAGACCGATTTCCAAGGTGTGTTCGGATGTGAAATGGGTTTATCTCTATGAAAGCAACCTCTCAGATGAATGTCTTCCAATAGCTGTCACATGGTTTACTAATGAGGAAGAATTAAACCTAGTTGGAAGTAATTTCGAAATTCTTCCGGAATGCCTCAACGAACGTCTCCATCTACGGGGACTAGAATTGTTTAATTGCTTGTCTCTTAAGAAAATAAGAGGGATTCGGCTAAATATTGTTATTTTGTCTGCGACAAACTGCAGATCATTGAATTTCTCAAGTAGAAGCATGCTAGTAAATCAGGAACTACTAAATGAGAGTAGAGAGGCCGATTTTTATTTTCCAGCTGCAGGAAGTGAAAGGATTCCGGAGTGGTTTGAGCACCAAAGCATAGGACCAACAAGAGTCTCTTTCTGGTTGCGTAACAAGATCCCTTCCATAGCTCTCTTCTTTTCTACTAAATGGGTGTGTAACCACGAAGAAAAACTTCAATTAAGAGTAAATTTGTTCATCAATGGCGATAAATATACCTTTTCTCTCGAGGAATTTATTTATGTTTCCTTGTTAGAAACAAATCATATATACCTAATTTATCTTGATTTGGATGGACTAGTTCACTGCTCGGATATCTACGAGAAACTTGAATCTAAATTGAACGAAGCATTTTTAAAAAAAGAATGGATCCATATGGAGCTGAAGTTAGAGAGCTATTATTGGAAATCGGAAAATGATTCCGATGAGATGATGAAATCGCTCCGCGCAAAATTTGGAATCCATGTGTTCAAGGAAGAAAACAACTTGGAAGATGTTGAATTCACCAATCCTTATAGAAAGAGGAGATCATATGAACATCTTAGGCTCTCAGTCTCAACATAA 3192 0.3706 MAMQSPSSSSSFSYGFTYQVFLSFRGKDTRDGFTGNLYKALIDKGIHTFIDDNELQRGDEITPSLVKAIEESRIFIPVFSINYASSSFCLDELVHIIHCYKTKGRFVLPVFYGVDPTHVRHHNGSYGEQLTKHEERFQNNKENMERLHQWKMALNQAANLSGYHFSSGYEYKFIEEIVKYISNKINRVSLHVADYPVGLHSRVQQVKSLLDKGSNDEVHMVGIYGAGGLGKSTLARAIYNFVGDQFEDICFIHNVRENSTQNNLKHLQEELLLKTVGLDIKLGDVSEGIPIIRERLHRKKILLILDDVDKLKQLQVLAGGFDWFGAGSTVIITTRDKHLLNSHEIKDMYAVEGLYGTEALELLRWMAFKNNKVPSNYEAILNRAVTYASGLPLAIEIVGSNLFRKSIEEWKYTLDGYEKIPNKEIQKILKVSFDALEEEEQSVFLDIACCFNGCRMTEVEEILRAHYGGSMTHRIQVLSEKSLIKIGYFEQSCFCSVTVHDLIKDMGKEIVRQESPKAPEKRSRLWLREDIIQVLEKNTENSDIEIISLNCGSTEATMDWDGKAFEKMKSLVTLIIKSDNFSEGSIRFPCNLRVLKWQKYHSQCIPYSFFNKKFENIKVLKFDNCEYLREISDVSCLPNLENFSFENCENLVTIHNSIGFLNKLEFLNVSGCIKLKSFPPLNLVSLKKLILSHCNSLQSFPEILSKIENIKDIDIRETSIEDFPVSFQNFTELISISISIGGCGMLRLPSFIFKMPKFSSIWVQKIYHNFMSRPISKVCSDVKWVYLYESNLSDECLPIAVTWFTNEEELNLVGSNFEILPECLNERLHLRGLELFNCLSLKKIRGIRLNIVILSATNCRSLNFSSRSMLVNQELLNESREADFYFPAAGSERIPEWFEHQSIGPTRVSFWLRNKIPSIALFFSTKWVCNHEEKLQLRVNLFINGDKYTFSLEEFIYVSLLETNHIYLIYLDLDGLVHCSDIYEKLESKLNEAFLKKEWIHMELKLESYYWKSENDSDEMMKSLRAKFGIHVFKEENNLEDVEFTNPYRKRRSYEHLRLSVST* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1842 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Tpr4g1842 1063 SMART till_3 17 160 IPR000157 GO:0007165
Tpr4g1842 1063 Gene3D - 354 437 IPR042197 -
Tpr4g1842 1063 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 163 IPR035897 -
Tpr4g1842 1063 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Tpr4g1842 1063 PANTHER ARCHAEAL ATPASE 28 1006 - -
Tpr4g1842 1063 CDD AAA 197 336 - -
Tpr4g1842 1063 SUPERFAMILY "Winged helix" DNA-binding domain 423 536 IPR036390 -
Tpr4g1842 1063 Gene3D - 184 348 IPR027417 -
Tpr4g1842 1063 PRINTS Disease resistance protein signature 220 235 - -
Tpr4g1842 1063 PRINTS Disease resistance protein signature 295 309 - -
Tpr4g1842 1063 PRINTS Disease resistance protein signature 388 402 - -
Tpr4g1842 1063 PRINTS Disease resistance protein signature 681 697 - -
Tpr4g1842 1063 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1006 IPR044974 GO:0006952
Tpr4g1842 1063 Pfam TIR domain 18 187 IPR000157 GO:0007165
Tpr4g1842 1063 Pfam NB-ARC domain 202 434 IPR002182 GO:0043531
Tpr4g1842 1063 SUPERFAMILY L domain-like 558 870 - -
Tpr4g1842 1063 Gene3D - 15 183 IPR035897 -
Tpr4g1842 1063 Gene3D Ribonuclease Inhibitor 525 881 IPR032675 -
Tpr4g1842 1063 SMART AAA_5 217 354 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1842 Tpr-Chr4 19308411 19313057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1842 197 845 WRKY Transcription Factor Family AT5G45050 29.251 5.67e-60 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1842 - - cam:101500791 1191.02