Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1831 ATGGGAAAGAAAGGGAGTTGGTTTTCAGCAATCAAGAGGGTTTTCACACACCACTCCAAGGGGAAGCAGGATTCAGCAGATAACAAAAGTACAAAAGAGAAGAAGAAAGGTCTAGGAAAACTAAAGCATGGGGAGACCAATTCTTTCATCCCTATCTTCAGAGAGCCAAGCAGCATCGAAAAGATATTTGGCGACTTCGAAAGAGAGCAACAAGTACTTACAATTAGGCCTACCACACCTCCCGAGAGACCGAAAACGCCACCTTATGTTCCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCTCCAAAGCCTCCTTCTCCAAGGGCTCCAACTCCTAAAGCTGCTTCTCCCCGAGTTACCTCTCCGAAAGCTACGTCCTCCCGGAATGTTCCTCAACATAAGGAGGTTCGCTACAGACCAGAACCGACTTTACAAAACCAGAATTCCTCGGCTACTAAGATCCAGGCTGCTTACAGAGGTTATATGGGCCGGAAGAGTTTTAGAGCTCTGAAGGGTTTGGTAAGACTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGACAGACAGTTAGTGCCATGAAGCACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAATCTCGACGAATTCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGATAAGGACGCTGGAAGTACCTTTGGCAAACTCTCTGAGGGAGGTAACGGTGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGATGCAAGGTTGCAGAAGAAGGTCGAAGCAATCATCAAAAGAGAGAGAGCAATGGCATTTGCATATTCGCATCAGTTGTGGAAGGCGACTCCAAAATCAACTCAAACACAGGCGACAGATATGCGAGCAAGTGGATTCCCATGGTGGTGGAACTGGTTGGAAAGACAACTACCCGCAGCAGCAAATCCACAAGAAAAACAAGTCCTAAAGAATTTTCAACTCACACCACCAAGACCGTATTCAGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCTCTCAAAGGCCTTTTGCCTTTGATAACATGGATACACCAACTCCAAAATCAACAAGATCAACTATATTTCCATCTTCAAAACCATCTAGAACTCCTCCATTTAGAACTCCACAAGGAAACAGTTCAAGCATGATGTCAAAACATTCAAGGCCAAGAGCAGTTGGATCCAATTCACCTTTCGACGTTCCTCTGAAGGACGATGATAGTCTCATGAGCTGTCCACCGTTTTCGGTTCCAAACTACATGACTCCAACTGTTTCTGCTAAGGCGAAAGTACGCGCTAATAGTAATCCAAGAGAAAGATTCGGCGGTGGTAGTAGTGGTTGTACAACTCCAACTCCCAGCAATGATTCGAGGAGAAGTTCATTCCCTTTGTCACAAGGTATAGGTTCATTCAAATGGAATAAAGGGTCATTGTTCTCTAGCAATAAGGATCCTCGTGGCTCTCAGTCCTCTAATAGGACACCAGATAAATATCAGTCACTTGAATCGATAGGAAATGTGAGTGTTGATTCGACGGTATCGTTGCCAGCTAGAGTTGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1614 0.4473 MGKKGSWFSAIKRVFTHHSKGKQDSADNKSTKEKKKGLGKLKHGETNSFIPIFREPSSIEKIFGDFEREQQVLTIRPTTPPERPKTPPYVPPRVASPRPPSPKPPSPRAPTPKAASPRVTSPKATSSRNVPQHKEVRYRPEPTLQNQNSSATKIQAAYRGYMGRKSFRALKGLVRLQGVVRGQNVKRQTVSAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAGSTFGKLSEGGNGEDWDDSLLTKEEVDARLQKKVEAIIKRERAMAFAYSHQLWKATPKSTQTQATDMRASGFPWWWNWLERQLPAAANPQEKQVLKNFQLTPPRPYSEQKTSPRPGSSSQRPFAFDNMDTPTPKSTRSTIFPSSKPSRTPPFRTPQGNSSSMMSKHSRPRAVGSNSPFDVPLKDDDSLMSCPPFSVPNYMTPTVSAKAKVRANSNPRERFGGGSSGCTTPTPSNDSRRSSFPLSQGIGSFKWNKGSLFSSNKDPRGSQSSNRTPDKYQSLESIGNVSVDSTVSLPARVGRKPFTRFV* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1831 537 Gene3D - 128 167 - -
Tpr4g1831 537 Pfam Protein of unknown function (DUF4005) 395 500 IPR025064 -
Tpr4g1831 537 SMART iq_5 146 168 IPR000048 GO:0005515
Tpr4g1831 537 MobiDBLite consensus disorder prediction 448 470 - -
Tpr4g1831 537 MobiDBLite consensus disorder prediction 73 151 - -
Tpr4g1831 537 MobiDBLite consensus disorder prediction 484 514 - -
Tpr4g1831 537 MobiDBLite consensus disorder prediction 329 401 - -
Tpr4g1831 537 MobiDBLite consensus disorder prediction 437 470 - -
Tpr4g1831 537 MobiDBLite consensus disorder prediction 80 112 - -
Tpr4g1831 537 MobiDBLite consensus disorder prediction 15 54 - -
Tpr4g1831 537 MobiDBLite consensus disorder prediction 329 405 - -
Tpr4g1831 537 ProSiteProfiles IQ motif profile. 147 175 IPR000048 GO:0005515
Tpr4g1831 537 MobiDBLite consensus disorder prediction 17 42 - -
Tpr4g1831 537 PANTHER IQ-DOMAIN 5-RELATED 1 534 - -
Tpr4g1831 537 Pfam IQ calmodulin-binding motif 149 168 IPR000048 GO:0005515
Tpr4g1831 537 PANTHER IQ-DOMAIN 13 1 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1831 Tpr-Chr4 19173057 19177302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1831 1 536 IQD Protein Family AT3G59690 53.792 2.85e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1831 - - gmx:100814804 743.806