Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1825 ATGGCATTAGATAACCATTCACCTTCTCTCGAGATATTAGTTCGAAGGCCTGAAGAATTATCACTATGGACTGGACCTCCATTCCCAAATGGTCAACCTAATGTCAAACTTGATAAAGTTAATTGCTTGAATGCAAAATTTAGTGATAATGGATCTTTGCTTATGGTTGTGAAATCTAATTCTGTGATTAGTATTTATGATTGTAAGAATTCTAAAGAGATTAGGTCTTTTGAAGTTCCTAATCTCGTGGCTTCTGTTTTGTCTCCTTGTGGAACTTATTTGCAAACATTTCAAAAACCTTCTGGGCCGCAAGATAAGAATGTCACATTATGGAAAACGGAGACCGGTGATATTGCTTATCAACATTCTCAGAAGAATTTGACAAAAACCAATTGGCCTTCGATTCAATTCAGCTCCGATGAAGCTACTGCATGCCGTGTAGCAACTAATGAGGTGCAGTTTTTCGACTCTGGGGATTTTTCTAAAGGATTTATTAATCGGTTAAGAGTTCCAGGAGTTGCTTCTGCCGAGCTTTCTAGTTCACCTGCTTCTCATGTAGCTGCATTTGTTCCGGAATCCAAGGGTGTTCCTGCTAGTGTACAAATATTTGCTTGTGGAAATGCTTCCCAAGGTCAACCTGTGGCCCGACGGAGCTTTTTCCGATGTTCTACCACCCAACTTAAATGGAATCATGGTTCAACTGGACTTCTAATTTTGGTGCAGTCTGATGTTGATAAAACCAATCAGAGTTACTATGGAGAATCGAAGTTATACTACCTTACAACAGATGGGGTGCATGAAGGATTAGTTCCTCTTCGGAAAGAGGGGCCTATTCATGATGCTCAGTGGTCATATTCAGGCTTAGAATTTGCTGTTGTGTATGGATTTATGCCTGCTAAAGCAACTCTGTTTGACAAGAAGTGCAATCCTCTACTGGAGCTTGGAACTGGTCCTTACAACACTATTCGATGGAACCCGAAAGGGAAATTTTTATGTTTGGCTGGATTCGGTAACTTGCCTGGTGATATGGTATTTTGGGATTACATAGAAAAGAAACAGCTTGCAGCAACCAAGGCTGAATGGTCCGTGACAAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACAGCGACAACAGCTCCAAGGCTTCAAGTTGACAACGGGATCAAGATTTTTCACTATAATGGGTCATTGTACTTCAAGAAGATGTTTGACAAATTGTACCAGGCTGATTGGAAACCAGAGTCACCAAGTAACTTTGGTGACATTACTGAATTAATCAAGTCTCTAGACTCGGTAAAACTTGAAGATAAAAAACCATCAGGTCAAGGATCAAAACCAACCCAGGCATCTACAAAAGCCCCTTCTGCCAATCCAACTGCACAAAAACCTGCCGCATATCGTCCGCCACATGCTAAGACTGCGGCTGTTATTCAGGCACAGTTGTTAGGAGAGAGCTCGGCAGAAACATTGAGCAAGAATGCTTTACGAAACAAGAAAAAGAGGGAGAAACAGAAGGAGAAAAAGGCTGCTGCAGATGCCAGTTCGTGA 1551 0.4152 MALDNHSPSLEILVRRPEELSLWTGPPFPNGQPNVKLDKVNCLNAKFSDNGSLLMVVKSNSVISIYDCKNSKEIRSFEVPNLVASVLSPCGTYLQTFQKPSGPQDKNVTLWKTETGDIAYQHSQKNLTKTNWPSIQFSSDEATACRVATNEVQFFDSGDFSKGFINRLRVPGVASAELSSSPASHVAAFVPESKGVPASVQIFACGNASQGQPVARRSFFRCSTTQLKWNHGSTGLLILVQSDVDKTNQSYYGESKLYYLTTDGVHEGLVPLRKEGPIHDAQWSYSGLEFAVVYGFMPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIEKKQLAATKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPESPSNFGDITELIKSLDSVKLEDKKPSGQGSKPTQASTKAPSANPTAQKPAAYRPPHAKTAAVIQAQLLGESSAETLSKNALRNKKKREKQKEKKAAADASS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1825 516 PIRSF Transl_init_eIF2A 5 516 IPR011387 GO:0003743|GO:0006413
Tpr4g1825 516 MobiDBLite consensus disorder prediction 488 516 - -
Tpr4g1825 516 SUPERFAMILY DPP6 N-terminal domain-like 42 395 - -
Tpr4g1825 516 MobiDBLite consensus disorder prediction 435 474 - -
Tpr4g1825 516 Gene3D - 36 410 IPR015943 GO:0005515
Tpr4g1825 516 MobiDBLite consensus disorder prediction 442 459 - -
Tpr4g1825 516 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
Tpr4g1825 516 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 9 514 IPR011387 GO:0003743|GO:0006413
Tpr4g1825 516 Coils Coil 493 513 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1825 87 418 Eukaryotic Initiation Factors Gene Family AT5G27640 24.309 2.07e-21 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1825 K15026 - gmx:100811589 886.715