Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1803 ATGGCTCTTTCCACTGAGATTGATGACCTAGTTCATTACCAATTACAAGAGAGTTTAAGAGTCATTGTGATTGATCATGACATCACTCGACTTCATGCCATCGCGAATATGTGTATTCAATACAACTATCATGTTATGACATCCACTTTGGCTTCTTTTGCCCTGAATCTTTTGAGACAAACAAAGGGTCCTTTTTTTGATTTGATATTAATTGATGCTCAAATGCCGGATATGGATACATATGACTTTTTGGAACGTGTTACACAAGAAATCAAAATTCCGGTTATTATAATGGGTGTTGATAACACAACAAGTGAAAGGATGAATGGGGCTTGTGATTATTGGCTAAAACCTTTGGACCCGAATGATATCAAAAGCATGTGGCTACATGTTACAAGAATTTCACATGATCAAATTCAAAGAGACTCGGAGGTGGTAAAAACCGGACAAAAACGAAAGAAGAGAGATGAAGAAAGTGAAAAAAAGATGAACCGAGTATCATGGAGGTCATCACCAGAACTTGAAGAAAAATTTATAGGAGCTGTGAATCATCTTGGCATTGACAAGGCAACACCAAAACAAATTATTGAGTTGATGGATGTTCGGGGTTTGGAAACCTCGCAGGTTGCTAGCCACTTGCAAAAATTTCGACTTCGTCGTTTCAATTGTTCAAGTAAAAAGGCAAAGCCAACAAGTGGAAGGGAAAATTTAAATGTTCCTCGTGAAAGCATTCAAGTTGTTGAGTCAATGGCAGAACATGATAAAAAATCTGATAACAACTTTCATGCACAACAACAACATCCGATTCCGATGGTGTTTGATGATTTTGAAGTTTCCAATATTTTGACTAACAAGACCAACATGATGCTAGATGATTCATCATCACTATATGAACAAGGATGGTATCCATTCGAAGATTTTGGTCCTTATTTTGACTAA 939 0.3685 MALSTEIDDLVHYQLQESLRVIVIDHDITRLHAIANMCIQYNYHVMTSTLASFALNLLRQTKGPFFDLILIDAQMPDMDTYDFLERVTQEIKIPVIIMGVDNTTSERMNGACDYWLKPLDPNDIKSMWLHVTRISHDQIQRDSEVVKTGQKRKKRDEESEKKMNRVSWRSSPELEEKFIGAVNHLGIDKATPKQIIELMDVRGLETSQVASHLQKFRLRRFNCSSKKAKPTSGRENLNVPRESIQVVESMAEHDKKSDNNFHAQQQHPIPMVFDDFEVSNILTNKTNMMLDDSSSLYEQGWYPFEDFGPYFD* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1803 312 Gene3D - 10 137 - -
Tpr4g1803 312 ProSiteProfiles Response regulatory domain profile. 20 132 IPR001789 GO:0000160
Tpr4g1803 312 CDD REC_typeB_ARR-like 21 131 - -
Tpr4g1803 312 SUPERFAMILY CheY-like 18 135 IPR011006 -
Tpr4g1803 312 SUPERFAMILY Homeodomain-like 171 219 IPR009057 -
Tpr4g1803 312 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 16 265 - -
Tpr4g1803 312 Pfam Response regulator receiver domain 21 126 IPR001789 GO:0000160
Tpr4g1803 312 Gene3D - 159 222 - -
Tpr4g1803 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 165 219 IPR006447 GO:0003677
Tpr4g1803 312 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 265 IPR045279 GO:0009736
Tpr4g1803 312 SMART REC_2 19 128 IPR001789 GO:0000160
Tpr4g1803 312 MobiDBLite consensus disorder prediction 141 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1803 Tpr-Chr4 18767596 18768534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1803 1 218 Response Regulator Gene Family AT4G31920 36.100 3.40e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr4g1803 Response_reg 6.4e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1803 - K14491 mtr:MTR_6g045327 184.882