Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1800 ATGGATGATTCAAATACACACAAAGTAGACACTGAATTAGGGAGTATGACTGAACAAGGTAATGTTGATGCAAAGCCGCCCGACGAACCACACAACGTTGTGCCTCTTCCTCTTCCTCATCCTCCACCTCCTCCTCCTCCTACAATTGATTTTCGCATCCAATTTACAACGGCAACAAAGTTTGATAATCGCGCACAAATGCTTAAATGGGTTAGTGATTTAGCACGTTCGTTAGGTTTCGTTACCGTGATTGTAAAGTCTGATAATGAGGCTATTGGTAGAAAGGGATATGTACATATTGGTTGCCAGAGAGGCGGTAAATATCGGGAGTACTGCCACAGGAAAAGCGAACAAAAGATGACGTTAAAGTGTGGTTGTCCGTTCAAATTGAAGAGTTATCTGTTGAGCAGCGGACAATGGAGTTTAAATGTTGTCAACGATGAACACAAACACGAGATGACTGGAGATTTTCAAGGTCATAAATATGCTCAGAGGCTTCTACCCGAAGAGAAAGAATTGGTCCGCGAACTGACAGAAAATATGGCACTCCCGCGGAATATCATGACGACACAGAAGAAGAGGCGACCACAGACAGCTACAACGATGAAACATATTTATAATATACGTTGTAGAATGAATATGGCTATTCGGGGTTCAAGAACAAAGATGCAACATCTCATGAAGTGTATGACCGAAGGCAAGTACTTGTATAACCACAGAGTTATTCCCGGAACTGAAACGATGAGCGATATTTTTTGGGCTCATCTGGACTCGGTTAAGATCTTTAATACGTTTCCAACTGTGGTTATGATGGATTCGACTTACAAGACAAACAAGTACCGACTCCCCCTGTTTGAAATTGTTGGTTCAACTTCAACCGGAAGGACTTACCCCGTAGGATTTGCCTTTTTGTCTCAGGAGAAGGAAGATAAGTTTGTATGGGCATTACAAAGCATTCGCGGGATGTTGCTTTGTCAAGACGACATGAAGGTCATTGTCACCGATCGAGACCAAGCTCTTATAAACGCGGTCAACATTGTTTTTCCCAAATGCACTCCTTTAATTTGTCGGTACCACATTCAAATGAACATCAAAGCAAACTTTATAAAAAAGGCAAAATTGGGTAGAAAACTGAGAATACGCACAGTATGGAGACACGTGAAGATACTTTGA 1173 0.4177 MDDSNTHKVDTELGSMTEQGNVDAKPPDEPHNVVPLPLPHPPPPPPPTIDFRIQFTTATKFDNRAQMLKWVSDLARSLGFVTVIVKSDNEAIGRKGYVHIGCQRGGKYREYCHRKSEQKMTLKCGCPFKLKSYLLSSGQWSLNVVNDEHKHEMTGDFQGHKYAQRLLPEEKELVRELTENMALPRNIMTTQKKRRPQTATTMKHIYNIRCRMNMAIRGSRTKMQHLMKCMTEGKYLYNHRVIPGTETMSDIFWAHLDSVKIFNTFPTVVMMDSTYKTNKYRLPLFEIVGSTSTGRTYPVGFAFLSQEKEDKFVWALQSIRGMLLCQDDMKVIVTDRDQALINAVNIVFPKCTPLICRYHIQMNIKANFIKKAKLGRKLRIRTVWRHVKIL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1800 390 MobiDBLite consensus disorder prediction 1 32 - -
Tpr4g1800 390 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 123 368 IPR031052 GO:0006355
Tpr4g1800 390 Pfam MULE transposase domain 268 363 IPR018289 -
Tpr4g1800 390 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 123 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1800 Tpr-Chr4 18730460 18731632 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g1800 MULE 3.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1800 - - vun:114181823 296.975