Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1790 ATGTCTGTCCTTTCTTCTTCTTTATTTGAATTCACTTTTTCTTTGTTTGTTTTCATCATTTTGACTGAAAATTCATCATGCTTAGCAATGTTTAGTAGCAAAATTACACGCATTCCTCGCGAGCTTAGAGTTGATTACTATGCTAAATCTTGTCCTCAGTTAGAACAACTTGTTGGTTCAGTCACTTCTCAACAATTCAAACAATCACCTGTTTCTGGACCTGCCACCATTCGTCTCCTTTTCCATGATTGTTTTGTAGAAGGTTGTGATGCATCAATTTTAATAGCGTCAAAGCCAGGGAGCAAAGAGTTAGCAGAGAAAGATGCAGAGGACAATAAAGATTTGAGGGTGGAAGGTTTTGAGACTATAAAGAAGGCCAAGGAAGTTGTGGAAAAAAAGTGTCCTAATGTAGTGTCTTGTGCAGACATTCTTGCAATTGCAGCTAGAGATTTTGTGCACCTAGCAGGGGGACCCTATTATCAAGTAAAGAAGGGAAGATGGGATGGAAAGATATCAATGGCATCAAGGGTAGGGTCCAACATCCCTCGTGCAAACTCAACCGTCGATGAGCTTATCAAACTTTTCGGCTCAAAAGGCTTAACCACACAGGACATGGTTGCACTCTCTGGGGCACATACAATTGGGTTTGCTCATTGCAAGAACTTTGTGAGCCGCCTCTACAATTACCGGGGAAAGGGTCAACCTGATCCGGATATGAACCCTAAACTATTGCAAGCTCTTAGAATGTACTGTCCAAATTTTGGTGGAAACTCAGATATTGTTGCACCATTTGATGCCACTACTCCTTTCATATTTGACCATGCATATTATGGTAACTTGCAAAGCAAGATGGGTTTGTTAGCATCTGATCAGGCTTTGGCTTTGGACCCGCGAACTAAGTCACTGGTTCAAGATTTTGCAAAGGATAAACAGAAGTTTTTTCAAGCTTTTGTAGCTGCTATAGACAAAATGAGTTTAGTGAAAGTTGTGAGAGGGAAAATGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTGA 1041 0.4063 MSVLSSSLFEFTFSLFVFIILTENSSCLAMFSSKITRIPRELRVDYYAKSCPQLEQLVGSVTSQQFKQSPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNKDLRVEGFETIKKAKEVVEKKCPNVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTVDELIKLFGSKGLTTQDMVALSGAHTIGFAHCKNFVSRLYNYRGKGQPDPDMNPKLLQALRMYCPNFGGNSDIVAPFDATTPFIFDHAYYGNLQSKMGLLASDQALALDPRTKSLVQDFAKDKQKFFQAFVAAIDKMSLVKVVRGKMHGEKRRDCSMHM* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1790 346 Gene3D Peroxidase, domain 2 182 324 - -
Tpr4g1790 346 CDD secretory_peroxidase 41 343 IPR033905 GO:0004601|GO:0042744
Tpr4g1790 346 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 Gene3D - 45 344 - -
Tpr4g1790 346 PANTHER PEROXIDASE 19 31 342 - -
Tpr4g1790 346 SUPERFAMILY Heme-dependent peroxidases 42 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Tpr4g1790 346 ProSiteProfiles Plant heme peroxidase family profile. 41 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Tpr4g1790 346 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 Pfam Peroxidase 61 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g1790 346 PANTHER PEROXIDASE 25-RELATED 31 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1790 Tpr-Chr4 18622817 18626007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1790 1 346 Peroxidase AT2G34060 61.782 1.60e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1790 K00430 - gmx:100777463 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1790 4 18622817 18626007 Tpr4g1790 4 18622817 18626007 ECH